Mercurial > repos > yhoogstrate > featurecounts_valid_gff

changeset 5:af66524b2937

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Uploaded
author yhoogstrate
date Wed, 13 Nov 2013 08:36:00 -0500
parents db4e02e6e1ab
children e9e3de414072
files tool_dependencies.xml
diffstat 1 files changed, 6 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Wed Nov 13 08:29:46 2013 -0500
+++ b/tool_dependencies.xml	Wed Nov 13 08:36:00 2013 -0500
@@ -1,9 +1,14 @@
 <?xml version="1.0"?>
 <tool_dependency>
 	<package name="featureCounts-valid-gff" version="1.4.0">
-		<install version="1.4.0">
+		<install version="1.4.1">
 			<actions>
 				<action type="shell_command">svn checkout https://featurecounts-valid-gff.googlecode.com/svn/trunk/ featurecounts-valid-gff &amp;&amp; cd featurecounts-valid-gff/src &amp;&amp; make -f Makefile.Linux &amp;&amp; cp ../bin/featureCounts ../../</action>
+
+				<action type="shell_command">svn checkout https://featurecounts-valid-gff.googlecode.com/svn/trunk/ featurecounts-valid-gff</action>
+				<action type="shell_command">cd featurecounts-valid-gff/src</action>
+				<action type="shell_command">make -f Makefile.Linux</action>
+				<action type="shell_command">cp ../bin/featureCounts ../../</action>
 				<action type="move_file">
 					<source>featurecounts-valid-gff/bin/featureCounts</source>
 					<destination>$INSTALL_DIR/bin/</destination>