changeset 14:98c9492ef336

Uploaded
author yhoogstrate
date Tue, 19 Nov 2013 09:30:40 -0500
parents 10b2aa6b5ec5
children becb1755e096
files tool_dependencies.xml
diffstat 1 files changed, 3 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Tue Nov 19 09:24:59 2013 -0500
+++ b/tool_dependencies.xml	Tue Nov 19 09:30:40 2013 -0500
@@ -3,10 +3,10 @@
 	<package name="featurecounts_valid_gff" version="1.4.0.1">
 		<install version="1.0">
 			<actions>
-				<action type="shell_command">svn checkout https://featurecounts-valid-gff.googlecode.com/svn/trunk/ featurecounts-valid-gff &amp;&amp; cd featurecounts-valid-gff/src &amp;&amp; make -f Makefile.Linux &amp;&amp; cp ../bin/featureCounts ../../ 2> /dev/null ; cd ../bin ; ls ; cd .. ; echo "" ; echo "-----" ; echo "" ; ls -als ; cd .. ; echo "" ; echo "-----" ; echo "" ; ls -als ; echo "" ; whoami</action>
+				<action type="shell_command">svn checkout https://featurecounts-valid-gff.googlecode.com/svn/trunk/ featurecounts-valid-gff &amp;&amp; cd featurecounts-valid-gff/src &amp;&amp; make -f Makefile.Linux &amp;&amp; cp ../bin/featureCounts ../../ 2> /dev/null ; cd ../bin ; ls ; cd .. ; echo "" ; echo "-----" ; echo "" ; ls -als ; cd .. ; echo "" ; echo "-----" ; echo "" ; ls -als ; echo "" ; whoami ; cp featureCounts bin/featurteCounts ; cp featureCounts $INSTALL_DIR/bin/featureCounts</action>
 				<action type="move_file">
-					<source>featurecounts-valid-gff/bin/featureCounts</source>
-					<destination>$INSTALL_DIR/bin/</destination>
+					<source>featureCounts</source>
+					<destination>$INSTALL_DIR/bin/featureCounts</destination>
 				</action>
 			</actions>
 		</install>