Mercurial > repos > yhoogstrate > featurecounts_valid_gff

changeset 16:77bf5658bb50

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Uploaded
author yhoogstrate
date Tue, 19 Nov 2013 09:39:56 -0500
parents becb1755e096
children 62b9b7d97ec9
files tool_dependencies.xml
diffstat 1 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Tue Nov 19 09:34:36 2013 -0500
+++ b/tool_dependencies.xml	Tue Nov 19 09:39:56 2013 -0500
@@ -3,9 +3,9 @@
 	<package name="featurecounts_valid_gff" version="1.4.0.1">
 		<install version="1.0">
 			<actions>
-				<action type="shell_command">svn checkout https://featurecounts-valid-gff.googlecode.com/svn/trunk/ featurecounts-valid-gff &amp;&amp; cd featurecounts-valid-gff/src &amp;&amp; make -f Makefile.Linux &amp;&amp; chmod 777 ../bin/* ; cp ../bin/featureCounts ../../ 2> /dev/null ; cd ../bin ; ls ; cd .. ; echo "" ; echo "-----" ; echo "" ; ls -als ; cd .. ; echo "" ; echo "-----" ; echo "" ; ls -als ; echo "" ; whoami ; cp featureCounts bin/featurteCounts ; cp featureCounts $INSTALL_DIR/bin/featureCounts</action>
+				<action type="shell_command">svn checkout https://featurecounts-valid-gff.googlecode.com/svn/trunk/ featurecounts-valid-gff &amp;&amp; cd featurecounts-valid-gff/src &amp;&amp; make -f Makefile.Linux &amp;&amp; chmod 777 ../bin/*</action>
 				<action type="move_file">
-					<source>featureCounts</source>
+					<source>bin/featureCounts</source>
 					<destination>$INSTALL_DIR/bin</destination>
 				</action>
 				<action type="set_environment">