Mercurial > repos > yhoogstrate > featurecounts_valid_gff

view tool_dependencies.xml @ 7:8e9015d0ccf6

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author yhoogstrate
date Wed, 13 Nov 2013 08:43:37 -0500
parents af66524b2937
children 16a46039eed6
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<?xml version="1.0"?>
<tool_dependency>
	<package name="featurecounts_valid_gff" version="1.4.0">
		<install version="1.4.2">
			<actions>
				<action type="shell_command">svn checkout https://featurecounts-valid-gff.googlecode.com/svn/trunk/ featurecounts-valid-gff &amp;&amp; cd featurecounts-valid-gff/src &amp;&amp; make -f Makefile.Linux &amp;&amp; cp ../bin/featureCounts ../../</action>

				<action type="shell_command">svn checkout https://featurecounts-valid-gff.googlecode.com/svn/trunk/ featurecounts-valid-gff</action>
				<action type="shell_command">cd featurecounts-valid-gff/src</action>
				<action type="shell_command">make -f Makefile.Linux</action>
				<action type="shell_command">cp ../bin/featureCounts ../../</action>
				<action type="move_file">
					<source>featurecounts-valid-gff/bin/featureCounts</source>
					<destination>$INSTALL_DIR/bin/</destination>
				</action>
			</actions>
		</install>
		<readme>
		</readme>
	</package>
</tool_dependency>