Mercurial > repos > yhoogstrate > featurecounts
view tool_dependencies.xml @ 16:0a7893453b61 draft
planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/featurecounts_galaxy_wrapper commit 632991bfb9084ec1c9565bcd610f4cce563fe3a3
author | yhoogstrate |
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date | Thu, 10 Sep 2015 04:55:27 -0400 |
parents | b486372c8948 |
children | 9f42ad6e35e2 |
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<?xml version="1.0"?> <tool_dependency> <package name="featurecounts" version="1.4.6.p1"> <repository changeset_revision="0b6d65d9f103" name="package_featurecounts_1_4_6" owner="yhoogstrate" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> <package name="featurecounts2bed" version="1.0.0"> <install version="1.0"> <actions> <action type="shell_command"> mkdir $INSTALL_DIR/bin && cp $REPOSITORY_INSTALL_DIR/featurecounts2bed.sh $INSTALL_DIR/bin/ </action> <action type="chmod"> <file mode="755">$INSTALL_DIR/bin/featurecounts2bed.sh</file> </action> <action type="set_environment"> <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> <environment_variable action="prepend_to" name="PATH">$REPOSITORY_INSTALL_DIR</environment_variable> </action> </actions> </install> </package> </tool_dependency>