Mercurial > repos > yhoogstrate > featurecounts

diff tool_dependencies.xml @ 8:1a288d568ac1 draft

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Uploaded
author yhoogstrate
date Thu, 19 Mar 2015 08:08:16 -0400
parents 2312bedfe2a3
children b2c1799ed8d1
line wrap: on
line diff
--- a/tool_dependencies.xml	Wed Nov 19 10:07:59 2014 -0500
+++ b/tool_dependencies.xml	Thu Mar 19 08:08:16 2015 -0400
@@ -1,11 +1,11 @@
 <?xml version="1.0"?>
 <tool_dependency>
-	<package name="featurecounts" version="1.4.4">
+	<package name="featurecounts" version="1.4.6.p1">
 		<install version="1.0">
 			<actions>
-				<action type="shell_command">wget http://sourceforge.net/projects/subread/files/subread-1.4.4/subread-1.4.4-source.tar.gz &amp;&amp; tar -zxvf subread-1.4.4-source.tar.gz &amp;&amp; cd subread-1.4.4-source/src/ &amp;&amp; make -f Makefile.Linux &amp;&amp; cd ../../</action>
+				<action type="shell_command">wget http://garr.dl.sourceforge.net/project/subread/subread-1.4.6-p1/subread-1.4.6-p1-source.tar.gz &amp;&amp; tar -zxvf subread-1.4.6-p1-source.tar.gz &amp;&amp; cd subread-1.4.6-p1-source/src/ &amp;&amp; make -f Makefile.Linux &amp;&amp; cd ../../</action>
 				<action type="move_file">
-					<source>../subread-1.4.4-source/bin/featureCounts</source>
+					<source>../subread-1.4.6-p1-source/bin/featureCounts</source>
 					<destination>$INSTALL_DIR/bin/</destination>
 				</action>
 				<action type="set_environment">