Mercurial > repos > yhoogstrate > edger_with_design_matrix
changeset 113:f871dff92e7c draft
planemo upload for repository https://bitbucket.org/EMCbioinf/galaxy-tool-shed-tools/raw/master/edger_with_design_matrix commit 097f2974042345a231e431299a031f236f3eb689-dirty
author | yhoogstrate |
---|---|
date | Tue, 01 Sep 2015 07:41:17 -0400 |
parents | f1ec1b5e9fa4 |
children | 5d7efbca6c75 |
files | edgeR_Convert_DGE_Table_to_Bedgraph.xml edgeR_Design_from_Expression_Matrix.xml |
diffstat | 2 files changed, 2 insertions(+), 2 deletions(-) [+] |
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--- a/edgeR_Convert_DGE_Table_to_Bedgraph.xml Tue Sep 01 07:36:38 2015 -0400 +++ b/edgeR_Convert_DGE_Table_to_Bedgraph.xml Tue Sep 01 07:41:17 2015 -0400 @@ -10,7 +10,7 @@ <requirement type="package" version="1.0.0">edger_dge_table_to_bedgraph</requirement> </requirements> - <command interpreter="python"> + <command> edger_dge_table_to_bedgraph -t $cpm_table -g $geneset
--- a/edgeR_Design_from_Expression_Matrix.xml Tue Sep 01 07:36:38 2015 -0400 +++ b/edgeR_Design_from_Expression_Matrix.xml Tue Sep 01 07:41:17 2015 -0400 @@ -10,7 +10,7 @@ <requirement type="package" version="1.0.0">design_matrix_creator</requirement> </requirements> - <command interpreter="python"> + <command> design_matrix_creator -c $expression_matrix