Mercurial > repos > yhoogstrate > edger_with_design_matrix

changeset 45:f710e5ed7cea draft

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Uploaded
author yhoogstrate
date Wed, 28 May 2014 05:42:17 -0400
parents 261b997b241f
children fb1aee12f4e2
files edgeR_Differential_Gene_Expression.xml
diffstat 1 files changed, 2 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/edgeR_Differential_Gene_Expression.xml	Wed May 28 05:24:12 2014 -0400
+++ b/edgeR_Differential_Gene_Expression.xml	Wed May 28 05:42:17 2014 -0400
@@ -155,7 +155,8 @@
     print("To:")
     print(design_matrix[,i])
   }
-  design_matrix[,i] <- as.factor(design_matrix[,i])
+  ## The following line seems to malfunction the script:
+  ##design_matrix[,i] <- as.factor(design_matrix[,i])
 }
 
 ## 1) In the expression matrix, you only want to have the samples described in the design matrix