Mercurial > repos > yhoogstrate > edger_with_design_matrix
changeset 10:a6ce4b7710d8 draft
Uploaded
| author | yhoogstrate |
|---|---|
| date | Thu, 09 Jan 2014 05:42:44 -0500 |
| parents | 82bff7137e81 |
| children | b8b3d63b60ab |
| files | edgeR_Design_Matrix.py |
| diffstat | 1 files changed, 2 insertions(+), 2 deletions(-) [+] |
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--- a/edgeR_Design_Matrix.py Thu Jan 09 05:24:29 2014 -0500 +++ b/edgeR_Design_Matrix.py Thu Jan 09 05:42:44 2014 -0500 @@ -162,8 +162,8 @@ if __name__=="__main__": parser = argparse.ArgumentParser(description="Create an edgeR design matrix with read-count datasets.") parser.add_argument("-o","--output", help="Output file, '-' for stdout.",required=True) - parser.add_argument("-u","--unpaired-samples", nargs="+", help='Unpaired sample files.') - parser.add_argument("-p","--paired-samples", nargs="+", help='Paired sample files: pat_x_sample_1.txt, .') + parser.add_argument("-u","--unpaired-samples", nargs="*", help='Unpaired sample files.') + parser.add_argument("-p","--paired-samples", nargs="*", help='Paired sample files: pat_x_sample_1.txt, .') parser.add_argument("-t","--treatments", nargs="+", help='Treatment conditions',required=True) parser.add_argument("-n","--sample-names", nargs="+", help='Paired sample files: pat_x_sample_1.txt:NAME .')