# HG changeset patch
# User yhoogstrate
# Date 1389264164 18000
# Node ID a6ce4b7710d8b521ba3e377b782de571eda8fc5f
# Parent  82bff7137e81fb3e22aa71bbe73b10a50f2dd3d0
Uploaded

diff -r 82bff7137e81 -r a6ce4b7710d8 edgeR_Design_Matrix.py
--- a/edgeR_Design_Matrix.py	Thu Jan 09 05:24:29 2014 -0500
+++ b/edgeR_Design_Matrix.py	Thu Jan 09 05:42:44 2014 -0500
@@ -162,8 +162,8 @@
 if __name__=="__main__":
 	parser = argparse.ArgumentParser(description="Create an edgeR design matrix with read-count datasets.")
 	parser.add_argument("-o","--output", help="Output file, '-' for stdout.",required=True)
-	parser.add_argument("-u","--unpaired-samples", nargs="+", help='Unpaired sample files.')
-	parser.add_argument("-p","--paired-samples", nargs="+", help='Paired sample files: pat_x_sample_1.txt, .')
+	parser.add_argument("-u","--unpaired-samples", nargs="*", help='Unpaired sample files.')
+	parser.add_argument("-p","--paired-samples", nargs="*", help='Paired sample files: pat_x_sample_1.txt, .')
 	parser.add_argument("-t","--treatments", nargs="+", help='Treatment conditions',required=True)
 	parser.add_argument("-n","--sample-names", nargs="+", help='Paired sample files: pat_x_sample_1.txt:NAME .')