Mercurial > repos > yhoogstrate > edger_with_design_matrix

changeset 14:15fd1a6798e0 draft

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Uploaded
author yhoogstrate
date Thu, 09 Jan 2014 08:29:43 -0500
parents 6e475c849a38
children db9eb4b6f778
files edgeR_DGE.xml
diffstat 1 files changed, 1 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/edgeR_DGE.xml	Thu Jan 09 08:27:09 2014 -0500
+++ b/edgeR_DGE.xml	Thu Jan 09 08:29:43 2014 -0500
@@ -106,8 +106,7 @@
 if(sum(empty_samples) > 0) {
   write(paste("There are ",sum(empty_samples)," empty samples found:",sep=""),stderr())
   write(colnames(read_counts)[empty_samples],stderr())
-}
-else {
+} else {
   dge = DGEList(counts=read_counts,genes=rownames(read_counts))
 
   design_tmp <- raw_data[3:length(raw_data)]