# HG changeset patch # User yhoogstrate # Date 1389274183 18000 # Node ID 15fd1a6798e0d06868f144e49b5e90b5d4ec7dcc # Parent 6e475c849a383930e4cca97773041fb959887fbd Uploaded diff -r 6e475c849a38 -r 15fd1a6798e0 edgeR_DGE.xml --- a/edgeR_DGE.xml Thu Jan 09 08:27:09 2014 -0500 +++ b/edgeR_DGE.xml Thu Jan 09 08:29:43 2014 -0500 @@ -106,8 +106,7 @@ if(sum(empty_samples) > 0) { write(paste("There are ",sum(empty_samples)," empty samples found:",sep=""),stderr()) write(colnames(read_counts)[empty_samples],stderr()) -} -else { +} else { dge = DGEList(counts=read_counts,genes=rownames(read_counts)) design_tmp <- raw_data[3:length(raw_data)]