Mercurial > repos > yhoogstrate > crossmap
diff test-data/test_bam_01_output_a.sam @ 13:7e32d2a88c07 draft
planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/crossmap_galaxy_wrapper commit 853297e61ca5fecafe4f09ec449e2731515b32c1-dirty
| author | yhoogstrate |
|---|---|
| date | Thu, 13 Aug 2015 07:43:24 -0400 |
| parents | |
| children | 263581d4dd90 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/test_bam_01_output_a.sam Thu Aug 13 07:43:24 2015 -0400 @@ -0,0 +1,23 @@ +@HD VN:1.0 SO:coordinate +@SQ SN:chr1 LN:247249719 +@SQ SN:chr10 LN:135374737 +@SQ SN:chr2 LN:242951149 +@SQ SN:chr3 LN:199501827 +@SQ SN:chr4 LN:191273063 +@PG ID:- VN:1.0.0 CL:cmatrix +@PG ID:CrossMap VN:0.1.10 +@CO Test data for CrossMap bam +@CO Liftover from original BAM/SAM file: +@CO Liftover is based on the chain file: +read_001 0 chr1 89863 60 50M = 1 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN * +read_002 0 chr2 90000 60 50M chr1 1 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN * +read_003 0 chr3 75000 60 50M chr1 1 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN * +read_006 0 chr1 989863 60 50M = 1 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN * +read_007 0 chr2 990000 60 50M chr1 1 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN * +read_008 0 chr3 975000 60 50M chr1 1 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN * +read_011 16 chr1 89863 60 50M = 1 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN * +read_012 16 chr2 90000 60 50M chr1 1 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN * +read_013 16 chr3 75000 60 50M chr1 1 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN * +read_016 16 chr1 989863 60 50M = 1 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN * +read_017 16 chr2 990000 60 50M chr1 1 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN * +read_018 16 chr3 975000 60 50M chr1 1 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN *