annotate ChoosePatterns.xml @ 0:ddd3dad04441 draft default tip

Uploaded
author yboursin
date Thu, 20 Oct 2016 08:59:24 -0400
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
1 <tool id="Choose_Patterns" name="Choose Patterns of Interest in a Multiple Condition Design" version="1.0.1">
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
2 <description>Choose patterns of interest in a multiple condition design</description>
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
3
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
4 <macros>
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
5 <import>macros.xml</import>
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
6 </macros>
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
7
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
8 <expand macro="requirements"/>
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
9 <expand macro="stdio"/>
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
10
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
11 <command>R --quiet --slave --file=$__tool_directory__/ChoosePatterns.R --args $All_Possible_Patterns $Rows_of_interests $output</command>
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
12 <inputs>
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
13 <param name="All_Possible_Patterns" type="data" label="All Possible Patterns" help=""/>
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
14 <param name="Rows_of_interests" type="text" size="60" value="1,2,3" label="Enter the rows
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
15 of interests (separated by comma, no space please)" />
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
16 </inputs>
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
17 <outputs>
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
18 <data format="tabular" name="output" />
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
19 </outputs>
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
20
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
21 <help>
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
22 Input could be obtained from Get All Possible Patterns Function
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
23
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
24 </help>
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
25
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
26 <expand macro="citation" />
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
27
ddd3dad04441 Uploaded
yboursin
parents:
diff changeset
28 </tool>