Mercurial > repos > yating-l > snap

changeset 8:7107b7be52da draft

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planemo upload commit 0ba99fe246099cc1827f71f2722d253becee64ba
author yating-l
date Thu, 21 Jul 2016 17:25:04 -0400
parents eba88632a533
children 006081904eec
files tool_dependencies.xml
diffstat 1 files changed, 1 insertions(+), 19 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Thu Jul 21 17:17:30 2016 -0400
+++ b/tool_dependencies.xml	Thu Jul 21 17:25:04 2016 -0400
@@ -1,24 +1,6 @@
 <?xml version="1.0"?>
 <tool_dependency>
     <package name="snap" version="0.1.0">
-	<install version="0.1.0">
-            <actions>
-                <action type="download_by_url">http://korflab.ucdavis.edu/Software/snap-2013-11-29.tar.gz</action>
-                <action type="shell_command">rm snap-2013-11-29.tar.gz</action>
-                <action type="move_directory_files">
-                    <source_directory>.</source_directory>
-                    <destination_directory>$INSTALL_DIR</destination_directory>
-                </action>
-                <action type="shell_command">make</action>
-                <action type="set_environment">
-                    <environment_variable name="ZOE" action="set_to">$INSTALL_DIR</environment_variable>
-                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
-                </action>
-            </actions>
-    </install>
-    <readme>SNAP is a general purpose gene finding program suitable for both eukaryotic
-            and prokaryotic genomes. SNAP is an acroynm for Semi-HMM-based Nucleic Acid
-            Parser.
-    </readme>
+        <repository changeset_revision="9b410d18d689" name="package_snap_0_1_0" owner="yating-l" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
 </tool_dependency>