Mercurial > repos > yating-l > snap

changeset 15:1173ac2753ce draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload commit d1ae46c18d1157b3dd74ac799911f5f232a53931-dirty
author yating-l
date Fri, 22 Jul 2016 10:44:38 -0400
parents 61209c63ef81
children 0e53fc7c15e7
files tool_dependencies.xml
diffstat 1 files changed, 4 insertions(+), 7 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Fri Jul 22 10:29:43 2016 -0400
+++ b/tool_dependencies.xml	Fri Jul 22 10:44:38 2016 -0400
@@ -5,16 +5,13 @@
             <actions_group>
                 <actions>
                     <action type="download_by_url">http://korflab.ucdavis.edu/Software/snap-2013-11-29.tar.gz</action>
-                    <action type="shell_command">tar xvzf snap-2013-11-29.tar.gz</action>
+                    <action type="shell_command">tar -xvzf snap-2013-11-29.tar.gz</action>
                     <action type="shell_command">rm -rf snap-2013-11-29.tar.gz</action>
-                    <action type="move_directory_files">
-                            <source_directory>.</source_directory>
-                            <destination_directory>$INSTALL_DIR</destination_directory>
-                    </action>
+                    <action type="change_directory">$INSTALL_DIR/snap</action>
                     <action type="shell_command">make</action>
                     <action type="set_environment">
-                        <environment_variable name="ZOE" action="set_to">$INSTALL_DIR/HMM</environment_variable>
-                        <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
+                        <environment_variable name="ZOE" action="set_to">$INSTALL_DIR/snap</environment_variable>
+                        <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/snap</environment_variable>
                     </action>
                 </actions>
             </actions_group>