Mercurial > repos > yating-l > jbrowsearchivecreator

annotate macros.xml @ 50:804e7217f27c draft default tip

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planemo upload for repository https://github.com/goeckslab/jbrowse-archive-creator.git commit 3afab1eb0da4823419945c523a1d37cd5973e7f6-dirty
author yating-l
date Fri, 20 Jul 2018 11:38:01 -0400
parents b1553f2a4942
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7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
yating-l
parents:
diff changeset
1 <macros>
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
yating-l
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2 <xml name="verify_hub_structure" token_genome="Dbia3" token_test="common">
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b1553f2a4942 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 12fb52d5b285935b2353d93a5aa291838df7893e
yating-l
parents: 32
diff changeset
3 <expand macro="verify_hub_structure_no_track" test="only_genome" />
b1553f2a4942 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 12fb52d5b285935b2353d93a5aa291838df7893e
yating-l
parents: 32
diff changeset
4 <extra_files type="directory" value="@TEST@/myHub/tracks" compare="re_match"/>
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7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
yating-l
parents:
diff changeset
5 </xml>
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
yating-l
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7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
yating-l
parents:
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7 <xml name="verify_hub_structure_no_track" token_genome="Dbia3" token_test="common">
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b1553f2a4942 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 12fb52d5b285935b2353d93a5aa291838df7893e
yating-l
parents: 32
diff changeset
8 <!-- trackList.json -->
b1553f2a4942 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 12fb52d5b285935b2353d93a5aa291838df7893e
yating-l
parents: 32
diff changeset
9 <extra_files type="file" name="myHub/trackList.json" value="@TEST/myHub/trackList.json" />
b1553f2a4942 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 12fb52d5b285935b2353d93a5aa291838df7893e
yating-l
parents: 32
diff changeset
10 <!-- seq/refSeqs.json -->
b1553f2a4942 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 12fb52d5b285935b2353d93a5aa291838df7893e
yating-l
parents: 32
diff changeset
11 <extra_files type="file" name="myHub/seq/refSeqs.json" value="@TEST/myHub/seq/refSeqs.json" />
b1553f2a4942 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 12fb52d5b285935b2353d93a5aa291838df7893e
yating-l
parents: 32
diff changeset
12 <!-- name/meta.json -->
b1553f2a4942 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 12fb52d5b285935b2353d93a5aa291838df7893e
yating-l
parents: 32
diff changeset
13 <extra_files type="file" name="myHub/names/meta.json" value="@TEST/myHub/names/meta.json" />
b1553f2a4942 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 12fb52d5b285935b2353d93a5aa291838df7893e
yating-l
parents: 32
diff changeset
14 <extra_files type="directory" value="@TEST@/myHub/names" compare="re_match"/>
b1553f2a4942 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 12fb52d5b285935b2353d93a5aa291838df7893e
yating-l
parents: 32
diff changeset
15 <extra_files type="directory" value="@TEST@/myHub/seq" compare="re_match"/>
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7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
yating-l
parents:
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16 </xml>
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
yating-l
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7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
yating-l
parents:
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18 </macros>