Mercurial > repos > yating-l > jbrowsearchivecreator

annotate test/lib/python2.7/_abcoll.py @ 3:7d1a9a91b989 draft

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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
author yating-l
date Thu, 18 May 2017 18:37:28 -0400
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3
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1 # Copyright 2007 Google, Inc. All Rights Reserved.
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2 # Licensed to PSF under a Contributor Agreement.
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3
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4 """Abstract Base Classes (ABCs) for collections, according to PEP 3119.
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5
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6 DON'T USE THIS MODULE DIRECTLY! The classes here should be imported
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7 via collections; they are defined here only to alleviate certain
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8 bootstrapping issues. Unit tests are in test_collections.
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9 """
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10
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11 from abc import ABCMeta, abstractmethod
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12 import sys
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13
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14 __all__ = ["Hashable", "Iterable", "Iterator",
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15 "Sized", "Container", "Callable",
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16 "Set", "MutableSet",
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17 "Mapping", "MutableMapping",
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18 "MappingView", "KeysView", "ItemsView", "ValuesView",
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19 "Sequence", "MutableSequence",
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20 ]
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21
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22 ### ONE-TRICK PONIES ###
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23
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24 def _hasattr(C, attr):
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25 try:
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26 return any(attr in B.__dict__ for B in C.__mro__)
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27 except AttributeError:
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28 # Old-style class
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29 return hasattr(C, attr)
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30
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31
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32 class Hashable:
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33 __metaclass__ = ABCMeta
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34
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35 @abstractmethod
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36 def __hash__(self):
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37 return 0
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38
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39 @classmethod
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40 def __subclasshook__(cls, C):
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41 if cls is Hashable:
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42 try:
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43 for B in C.__mro__:
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44 if "__hash__" in B.__dict__:
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45 if B.__dict__["__hash__"]:
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46 return True
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47 break
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48 except AttributeError:
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49 # Old-style class
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50 if getattr(C, "__hash__", None):
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51 return True
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52 return NotImplemented
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53
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54
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55 class Iterable:
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56 __metaclass__ = ABCMeta
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57
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58 @abstractmethod
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59 def __iter__(self):
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60 while False:
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61 yield None
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62
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63 @classmethod
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64 def __subclasshook__(cls, C):
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65 if cls is Iterable:
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66 if _hasattr(C, "__iter__"):
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67 return True
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68 return NotImplemented
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69
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70 Iterable.register(str)
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71
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72
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73 class Iterator(Iterable):
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74
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75 @abstractmethod
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76 def next(self):
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77 'Return the next item from the iterator. When exhausted, raise StopIteration'
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78 raise StopIteration
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79
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80 def __iter__(self):
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81 return self
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82
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83 @classmethod
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84 def __subclasshook__(cls, C):
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85 if cls is Iterator:
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86 if _hasattr(C, "next") and _hasattr(C, "__iter__"):
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87 return True
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88 return NotImplemented
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89
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90
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91 class Sized:
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92 __metaclass__ = ABCMeta
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93
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94 @abstractmethod
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95 def __len__(self):
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96 return 0
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97
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98 @classmethod
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99 def __subclasshook__(cls, C):
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100 if cls is Sized:
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101 if _hasattr(C, "__len__"):
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102 return True
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103 return NotImplemented
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104
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105
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106 class Container:
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107 __metaclass__ = ABCMeta
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108
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109 @abstractmethod
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110 def __contains__(self, x):
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111 return False
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112
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113 @classmethod
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114 def __subclasshook__(cls, C):
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115 if cls is Container:
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116 if _hasattr(C, "__contains__"):
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117 return True
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118 return NotImplemented
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119
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120
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121 class Callable:
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122 __metaclass__ = ABCMeta
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123
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124 @abstractmethod
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125 def __call__(self, *args, **kwds):
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126 return False
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127
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128 @classmethod
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129 def __subclasshook__(cls, C):
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130 if cls is Callable:
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131 if _hasattr(C, "__call__"):
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132 return True
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133 return NotImplemented
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134
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135
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136 ### SETS ###
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137
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138
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139 class Set(Sized, Iterable, Container):
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140 """A set is a finite, iterable container.
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141
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142 This class provides concrete generic implementations of all
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143 methods except for __contains__, __iter__ and __len__.
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144
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145 To override the comparisons (presumably for speed, as the
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146 semantics are fixed), redefine __le__ and __ge__,
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147 then the other operations will automatically follow suit.
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148 """
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149
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150 def __le__(self, other):
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151 if not isinstance(other, Set):
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152 return NotImplemented
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153 if len(self) > len(other):
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154 return False
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155 for elem in self:
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156 if elem not in other:
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157 return False
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158 return True
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159
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160 def __lt__(self, other):
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161 if not isinstance(other, Set):
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162 return NotImplemented
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163 return len(self) < len(other) and self.__le__(other)
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164
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165 def __gt__(self, other):
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166 if not isinstance(other, Set):
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167 return NotImplemented
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168 return len(self) > len(other) and self.__ge__(other)
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169
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170 def __ge__(self, other):
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171 if not isinstance(other, Set):
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172 return NotImplemented
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173 if len(self) < len(other):
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174 return False
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175 for elem in other:
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176 if elem not in self:
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177 return False
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178 return True
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179
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180 def __eq__(self, other):
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181 if not isinstance(other, Set):
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182 return NotImplemented
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183 return len(self) == len(other) and self.__le__(other)
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184
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185 def __ne__(self, other):
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186 return not (self == other)
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187
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188 @classmethod
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189 def _from_iterable(cls, it):
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190 '''Construct an instance of the class from any iterable input.
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191
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192 Must override this method if the class constructor signature
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193 does not accept an iterable for an input.
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194 '''
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195 return cls(it)
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196
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197 def __and__(self, other):
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198 if not isinstance(other, Iterable):
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199 return NotImplemented
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200 return self._from_iterable(value for value in other if value in self)
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201
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202 __rand__ = __and__
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203
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204 def isdisjoint(self, other):
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205 'Return True if two sets have a null intersection.'
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206 for value in other:
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207 if value in self:
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208 return False
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209 return True
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210
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211 def __or__(self, other):
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212 if not isinstance(other, Iterable):
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213 return NotImplemented
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214 chain = (e for s in (self, other) for e in s)
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215 return self._from_iterable(chain)
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216
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217 __ror__ = __or__
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218
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219 def __sub__(self, other):
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220 if not isinstance(other, Set):
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221 if not isinstance(other, Iterable):
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222 return NotImplemented
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223 other = self._from_iterable(other)
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224 return self._from_iterable(value for value in self
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225 if value not in other)
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226
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227 def __rsub__(self, other):
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228 if not isinstance(other, Set):
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229 if not isinstance(other, Iterable):
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230 return NotImplemented
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231 other = self._from_iterable(other)
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232 return self._from_iterable(value for value in other
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233 if value not in self)
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234
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235 def __xor__(self, other):
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236 if not isinstance(other, Set):
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237 if not isinstance(other, Iterable):
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238 return NotImplemented
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239 other = self._from_iterable(other)
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240 return (self - other) | (other - self)
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241
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242 __rxor__ = __xor__
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243
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244 # Sets are not hashable by default, but subclasses can change this
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245 __hash__ = None
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246
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247 def _hash(self):
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248 """Compute the hash value of a set.
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249
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250 Note that we don't define __hash__: not all sets are hashable.
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251 But if you define a hashable set type, its __hash__ should
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252 call this function.
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253
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254 This must be compatible __eq__.
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255
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256 All sets ought to compare equal if they contain the same
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257 elements, regardless of how they are implemented, and
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258 regardless of the order of the elements; so there's not much
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259 freedom for __eq__ or __hash__. We match the algorithm used
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260 by the built-in frozenset type.
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261 """
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262 MAX = sys.maxint
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263 MASK = 2 * MAX + 1
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264 n = len(self)
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265 h = 1927868237 * (n + 1)
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266 h &= MASK
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267 for x in self:
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268 hx = hash(x)
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269 h ^= (hx ^ (hx << 16) ^ 89869747) * 3644798167
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270 h &= MASK
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271 h = h * 69069 + 907133923
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272 h &= MASK
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273 if h > MAX:
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274 h -= MASK + 1
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275 if h == -1:
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276 h = 590923713
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277 return h
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278
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279 Set.register(frozenset)
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280
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281
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282 class MutableSet(Set):
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283 """A mutable set is a finite, iterable container.
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284
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285 This class provides concrete generic implementations of all
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286 methods except for __contains__, __iter__, __len__,
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287 add(), and discard().
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288
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289 To override the comparisons (presumably for speed, as the
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290 semantics are fixed), all you have to do is redefine __le__ and
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291 then the other operations will automatically follow suit.
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292 """
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293
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294 @abstractmethod
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295 def add(self, value):
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296 """Add an element."""
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297 raise NotImplementedError
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298
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299 @abstractmethod
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300 def discard(self, value):
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301 """Remove an element. Do not raise an exception if absent."""
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302 raise NotImplementedError
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303
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304 def remove(self, value):
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305 """Remove an element. If not a member, raise a KeyError."""
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306 if value not in self:
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307 raise KeyError(value)
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308 self.discard(value)
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309
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310 def pop(self):
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311 """Return the popped value. Raise KeyError if empty."""
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312 it = iter(self)
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313 try:
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314 value = next(it)
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315 except StopIteration:
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316 raise KeyError
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317 self.discard(value)
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318 return value
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319
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320 def clear(self):
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321 """This is slow (creates N new iterators!) but effective."""
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322 try:
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323 while True:
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324 self.pop()
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325 except KeyError:
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326 pass
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327
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328 def __ior__(self, it):
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329 for value in it:
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330 self.add(value)
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331 return self
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332
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333 def __iand__(self, it):
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334 for value in (self - it):
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335 self.discard(value)
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336 return self
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337
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338 def __ixor__(self, it):
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339 if it is self:
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340 self.clear()
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341 else:
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342 if not isinstance(it, Set):
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343 it = self._from_iterable(it)
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344 for value in it:
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345 if value in self:
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346 self.discard(value)
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347 else:
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348 self.add(value)
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349 return self
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350
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351 def __isub__(self, it):
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352 if it is self:
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353 self.clear()
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354 else:
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355 for value in it:
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356 self.discard(value)
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357 return self
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358
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359 MutableSet.register(set)
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360
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361
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362 ### MAPPINGS ###
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363
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364
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365 class Mapping(Sized, Iterable, Container):
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366
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367 """A Mapping is a generic container for associating key/value
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368 pairs.
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369
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370 This class provides concrete generic implementations of all
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371 methods except for __getitem__, __iter__, and __len__.
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372
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373 """
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374
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375 @abstractmethod
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376 def __getitem__(self, key):
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377 raise KeyError
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378
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379 def get(self, key, default=None):
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380 'D.get(k[,d]) -> D[k] if k in D, else d. d defaults to None.'
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381 try:
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382 return self[key]
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383 except KeyError:
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diff changeset
384 return default
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
385
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
386 def __contains__(self, key):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
387 try:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
388 self[key]
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
389 except KeyError:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
390 return False
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
391 else:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
392 return True
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
393
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
394 def iterkeys(self):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
395 'D.iterkeys() -> an iterator over the keys of D'
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
396 return iter(self)
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
397
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
398 def itervalues(self):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
399 'D.itervalues() -> an iterator over the values of D'
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
400 for key in self:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
401 yield self[key]
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
402
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
403 def iteritems(self):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
404 'D.iteritems() -> an iterator over the (key, value) items of D'
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
405 for key in self:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
406 yield (key, self[key])
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
407
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
408 def keys(self):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
409 "D.keys() -> list of D's keys"
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
410 return list(self)
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
411
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
412 def items(self):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
413 "D.items() -> list of D's (key, value) pairs, as 2-tuples"
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
414 return [(key, self[key]) for key in self]
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
415
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
416 def values(self):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
417 "D.values() -> list of D's values"
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
418 return [self[key] for key in self]
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
419
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
420 # Mappings are not hashable by default, but subclasses can change this
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
421 __hash__ = None
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
422
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
423 def __eq__(self, other):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
424 if not isinstance(other, Mapping):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
425 return NotImplemented
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
426 return dict(self.items()) == dict(other.items())
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
427
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
428 def __ne__(self, other):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
429 return not (self == other)
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
430
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
431 class MappingView(Sized):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
432
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
433 def __init__(self, mapping):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
434 self._mapping = mapping
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
435
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
436 def __len__(self):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
437 return len(self._mapping)
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
438
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
439 def __repr__(self):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
440 return '{0.__class__.__name__}({0._mapping!r})'.format(self)
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
441
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
442
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
443 class KeysView(MappingView, Set):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
444
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
445 @classmethod
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
446 def _from_iterable(self, it):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
447 return set(it)
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
448
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
449 def __contains__(self, key):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
450 return key in self._mapping
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
451
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
452 def __iter__(self):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
453 for key in self._mapping:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
454 yield key
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
455
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
456 KeysView.register(type({}.viewkeys()))
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
457
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
458 class ItemsView(MappingView, Set):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
459
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
460 @classmethod
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
461 def _from_iterable(self, it):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
462 return set(it)
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
463
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
464 def __contains__(self, item):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
465 key, value = item
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
466 try:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
467 v = self._mapping[key]
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
468 except KeyError:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
469 return False
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
470 else:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
471 return v == value
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
472
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
473 def __iter__(self):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
474 for key in self._mapping:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
475 yield (key, self._mapping[key])
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
476
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
477 ItemsView.register(type({}.viewitems()))
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
478
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
479 class ValuesView(MappingView):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
480
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
481 def __contains__(self, value):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
482 for key in self._mapping:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
483 if value == self._mapping[key]:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
484 return True
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
485 return False
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
486
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
487 def __iter__(self):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
488 for key in self._mapping:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
489 yield self._mapping[key]
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
490
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
491 ValuesView.register(type({}.viewvalues()))
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
492
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
493 class MutableMapping(Mapping):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
494
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
495 """A MutableMapping is a generic container for associating
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
496 key/value pairs.
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
497
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
498 This class provides concrete generic implementations of all
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
499 methods except for __getitem__, __setitem__, __delitem__,
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
500 __iter__, and __len__.
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
501
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
502 """
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
503
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
504 @abstractmethod
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
505 def __setitem__(self, key, value):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
506 raise KeyError
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
507
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
508 @abstractmethod
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
509 def __delitem__(self, key):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
510 raise KeyError
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
511
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
512 __marker = object()
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
513
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
514 def pop(self, key, default=__marker):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
515 '''D.pop(k[,d]) -> v, remove specified key and return the corresponding value.
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
516 If key is not found, d is returned if given, otherwise KeyError is raised.
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
517 '''
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
518 try:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
519 value = self[key]
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
520 except KeyError:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
521 if default is self.__marker:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
522 raise
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
523 return default
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
524 else:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
525 del self[key]
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
526 return value
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
527
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
528 def popitem(self):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
529 '''D.popitem() -> (k, v), remove and return some (key, value) pair
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
530 as a 2-tuple; but raise KeyError if D is empty.
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
531 '''
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
532 try:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
533 key = next(iter(self))
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
534 except StopIteration:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
535 raise KeyError
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
536 value = self[key]
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
537 del self[key]
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
538 return key, value
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
539
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
540 def clear(self):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
541 'D.clear() -> None. Remove all items from D.'
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
542 try:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
543 while True:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
544 self.popitem()
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
545 except KeyError:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
546 pass
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
547
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
548 def update(*args, **kwds):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
549 ''' D.update([E, ]**F) -> None. Update D from mapping/iterable E and F.
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
550 If E present and has a .keys() method, does: for k in E: D[k] = E[k]
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
551 If E present and lacks .keys() method, does: for (k, v) in E: D[k] = v
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
552 In either case, this is followed by: for k, v in F.items(): D[k] = v
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
553 '''
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
554 if not args:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
555 raise TypeError("descriptor 'update' of 'MutableMapping' object "
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
556 "needs an argument")
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
557 self = args[0]
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
558 args = args[1:]
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
559 if len(args) > 1:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
560 raise TypeError('update expected at most 1 arguments, got %d' %
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
561 len(args))
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
562 if args:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
563 other = args[0]
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
564 if isinstance(other, Mapping):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
565 for key in other:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
566 self[key] = other[key]
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
567 elif hasattr(other, "keys"):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
568 for key in other.keys():
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
569 self[key] = other[key]
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
570 else:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
571 for key, value in other:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
572 self[key] = value
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
573 for key, value in kwds.items():
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
574 self[key] = value
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
575
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
576 def setdefault(self, key, default=None):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
577 'D.setdefault(k[,d]) -> D.get(k,d), also set D[k]=d if k not in D'
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
578 try:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
579 return self[key]
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
580 except KeyError:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
581 self[key] = default
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
582 return default
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
583
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
584 MutableMapping.register(dict)
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
585
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
586
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
587 ### SEQUENCES ###
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
588
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
589
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
590 class Sequence(Sized, Iterable, Container):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
591 """All the operations on a read-only sequence.
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
592
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
593 Concrete subclasses must override __new__ or __init__,
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
594 __getitem__, and __len__.
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
595 """
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
596
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
597 @abstractmethod
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
598 def __getitem__(self, index):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
599 raise IndexError
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
600
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
601 def __iter__(self):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
602 i = 0
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
603 try:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
604 while True:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
605 v = self[i]
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
606 yield v
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
607 i += 1
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
608 except IndexError:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
609 return
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
610
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
611 def __contains__(self, value):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
612 for v in self:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
613 if v == value:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
614 return True
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
615 return False
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
616
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
617 def __reversed__(self):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
618 for i in reversed(range(len(self))):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
619 yield self[i]
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
620
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
621 def index(self, value):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
622 '''S.index(value) -> integer -- return first index of value.
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
623 Raises ValueError if the value is not present.
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
624 '''
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
625 for i, v in enumerate(self):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
626 if v == value:
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
627 return i
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
628 raise ValueError
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
629
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
630 def count(self, value):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
631 'S.count(value) -> integer -- return number of occurrences of value'
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
632 return sum(1 for v in self if v == value)
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
633
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
634 Sequence.register(tuple)
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
635 Sequence.register(basestring)
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
636 Sequence.register(buffer)
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
637 Sequence.register(xrange)
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
638
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
639
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
640 class MutableSequence(Sequence):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
641
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
642 """All the operations on a read-only sequence.
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
643
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
644 Concrete subclasses must provide __new__ or __init__,
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
645 __getitem__, __setitem__, __delitem__, __len__, and insert().
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
646
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
647 """
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
648
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
649 @abstractmethod
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
650 def __setitem__(self, index, value):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
651 raise IndexError
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
652
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
653 @abstractmethod
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
654 def __delitem__(self, index):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
655 raise IndexError
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
656
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
657 @abstractmethod
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
658 def insert(self, index, value):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
659 'S.insert(index, object) -- insert object before index'
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
660 raise IndexError
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
661
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
662 def append(self, value):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
663 'S.append(object) -- append object to the end of the sequence'
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
664 self.insert(len(self), value)
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
665
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
666 def reverse(self):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
667 'S.reverse() -- reverse *IN PLACE*'
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
668 n = len(self)
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
669 for i in range(n//2):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
670 self[i], self[n-i-1] = self[n-i-1], self[i]
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
diff changeset
671
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
yating-l
parents:
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672 def extend(self, values):
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673 'S.extend(iterable) -- extend sequence by appending elements from the iterable'
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674 for v in values:
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675 self.append(v)
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676
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677 def pop(self, index=-1):
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678 '''S.pop([index]) -> item -- remove and return item at index (default last).
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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679 Raise IndexError if list is empty or index is out of range.
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680 '''
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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681 v = self[index]
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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682 del self[index]
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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683 return v
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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684
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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685 def remove(self, value):
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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686 '''S.remove(value) -- remove first occurrence of value.
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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687 Raise ValueError if the value is not present.
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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688 '''
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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689 del self[self.index(value)]
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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690
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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691 def __iadd__(self, values):
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692 self.extend(values)
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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693 return self
7d1a9a91b989 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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694
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695 MutableSequence.register(list)