Mercurial > repos > yating-l > jbrowse_hub

changeset 62:86d6f50870dd draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/Yating-L/jbrowse_hub commit 79699b5964c673b7eb815b4d669ab7f07ea2068a-dirty
author yating-l
date Tue, 11 Apr 2017 16:08:57 -0400
parents ea301a2d2229
children
files jbrowse_hub.py jbrowse_hub.xml
diffstat 2 files changed, 4 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/jbrowse_hub.py	Fri Apr 07 12:51:09 2017 -0400
+++ b/jbrowse_hub.py	Tue Apr 11 16:08:57 2017 -0400
@@ -75,7 +75,9 @@
     out_path = 'unknown.html'
     extra_files_path = '.'
     tool_directory = '.'
-    jbrowse_host = args.jbrowse_host
+    jbrowse_host = ''
+    if args.jbrowse_host:
+        jbrowse_host = args.jbrowse_host
     if args.genome_name:
         genome = args.genome_name
     if args.out:
--- a/jbrowse_hub.xml	Fri Apr 07 12:51:09 2017 -0400
+++ b/jbrowse_hub.xml	Tue Apr 11 16:08:57 2017 -0400
@@ -68,7 +68,7 @@
                 #if $f.formatChoice.gff3Choice.gff3_select == 'gff3_generic'
                     --gff3 $f.formatChoice.gff3Choice.GFF3_generic
                     #silent $prepare_json($f.formatChoice.gff3Choice.GFF3_generic, extra_data_dict)
-                #esif $f.formatChoice.gff3Choice.gff3_select == 'gff3_transcript'
+                #elif $f.formatChoice.gff3Choice.gff3_select == 'gff3_transcript'
                     --gff3_transcript $f.formatChoice.gff3Choice.GFF3_transcript
                     #silent $prepare_json($f.formatChoice.gff3Choice.GFF3_transcript, extra_data_dict)
                 #elif $f.formatChoice.gff3Choice.gff3_select == 'gff3_mrna'