# HG changeset patch
# User yating-l
# Date 1491941337 14400
# Node ID 86d6f50870ddca9636709be5ec0ff368f8e865bc
# Parent  ea301a2d222944787b14565055353944c3c96541
planemo upload for repository https://github.com/Yating-L/jbrowse_hub commit 79699b5964c673b7eb815b4d669ab7f07ea2068a-dirty

diff -r ea301a2d2229 -r 86d6f50870dd jbrowse_hub.py
--- a/jbrowse_hub.py	Fri Apr 07 12:51:09 2017 -0400
+++ b/jbrowse_hub.py	Tue Apr 11 16:08:57 2017 -0400
@@ -75,7 +75,9 @@
     out_path = 'unknown.html'
     extra_files_path = '.'
     tool_directory = '.'
-    jbrowse_host = args.jbrowse_host
+    jbrowse_host = ''
+    if args.jbrowse_host:
+        jbrowse_host = args.jbrowse_host
     if args.genome_name:
         genome = args.genome_name
     if args.out:
diff -r ea301a2d2229 -r 86d6f50870dd jbrowse_hub.xml
--- a/jbrowse_hub.xml	Fri Apr 07 12:51:09 2017 -0400
+++ b/jbrowse_hub.xml	Tue Apr 11 16:08:57 2017 -0400
@@ -68,7 +68,7 @@
                 #if $f.formatChoice.gff3Choice.gff3_select == 'gff3_generic'
                     --gff3 $f.formatChoice.gff3Choice.GFF3_generic
                     #silent $prepare_json($f.formatChoice.gff3Choice.GFF3_generic, extra_data_dict)
-                #esif $f.formatChoice.gff3Choice.gff3_select == 'gff3_transcript'
+                #elif $f.formatChoice.gff3Choice.gff3_select == 'gff3_transcript'
                     --gff3_transcript $f.formatChoice.gff3Choice.GFF3_transcript
                     #silent $prepare_json($f.formatChoice.gff3Choice.GFF3_transcript, extra_data_dict)
                 #elif $f.formatChoice.gff3Choice.gff3_select == 'gff3_mrna'