Mercurial > repos > yating-l > jbrowse_hub
changeset 17:99d66676570b draft
planemo upload for repository https://github.com/Yating-L/jbrowse_hub commit f18ea51d27ec7addfa6413716391cfefebc8acbc-dirty
| author | yating-l |
|---|---|
| date | Tue, 14 Mar 2017 15:20:47 -0400 |
| parents | f2285f29a6fa |
| children | 7a775b231676 |
| files | jbrowse_hub.xml |
| diffstat | 1 files changed, 12 insertions(+), 0 deletions(-) [+] |
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--- a/jbrowse_hub.xml Tue Mar 14 15:15:54 2017 -0400 +++ b/jbrowse_hub.xml Tue Mar 14 15:20:47 2017 -0400 @@ -27,6 +27,9 @@ #if $f.formatChoice.format_select == 'bam' --bam $f.formatChoice.BAM #end if + #if $f.formatChoice.format_select == 'bai' + --bam $f.formatChoice.BAI + #end if #if $f.formatChoice.format_select == 'gff3_transcript' --gff3_transcript $f.formatChoice.GFF3_transcript #end if @@ -55,6 +58,7 @@ <conditional name="formatChoice"> <param name="format_select" type="select" label="Format"> <option value="bam" selected="true">BAM</option> + <option value="bai" selected="true">BAI (BAM index)</option> <option value="bed">BED</option> <option value="blastxml">BLASTXML</option> <option value="bigwig">BIGWIG</option> @@ -70,6 +74,14 @@ type="data" label="BAM File" /> + </when> + <when value="bai"> + <param + format="bai" + name="BAI" + type="data" + label="BAI File" + /> </when> <when value="bed"> <conditional name="bedChoice">