Mercurial > repos > yating-l > jbrowse_hub

comparison jbrowse_hub.py @ 62:86d6f50870dd draft default tip

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planemo upload for repository https://github.com/Yating-L/jbrowse_hub commit 79699b5964c673b7eb815b4d669ab7f07ea2068a-dirty
author yating-l
date Tue, 11 Apr 2017 16:08:57 -0400
parents ed17bb465bde
children
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61:ea301a2d2229 62:86d6f50870dd
73 reference = args.fasta 73 reference = args.fasta
74 genome = 'unknown' 74 genome = 'unknown'
75 out_path = 'unknown.html' 75 out_path = 'unknown.html'
76 extra_files_path = '.' 76 extra_files_path = '.'
77 tool_directory = '.' 77 tool_directory = '.'
78 jbrowse_host = args.jbrowse_host 78 jbrowse_host = ''
79 if args.jbrowse_host:
80 jbrowse_host = args.jbrowse_host
79 if args.genome_name: 81 if args.genome_name:
80 genome = args.genome_name 82 genome = args.genome_name
81 if args.out: 83 if args.out:
82 out_path = args.out 84 out_path = args.out
83 if args.extra_files_path: 85 if args.extra_files_path: