Mercurial > repos > yating-l > jbrowse_hub
comparison tool_dependencies.xml @ 10:e76638b1532c draft
planemo upload for repository https://github.com/Yating-L/jbrowse_hub commit f18ea51d27ec7addfa6413716391cfefebc8acbc-dirty
| author | yating-l |
|---|---|
| date | Tue, 14 Mar 2017 13:11:22 -0400 |
| parents | 83202aa58873 |
| children | 22efe9f6e8a8 |
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| 9:83202aa58873 | 10:e76638b1532c |
|---|---|
| 59 <package name="jbrowse_tools" version="1.12.1"> | 59 <package name="jbrowse_tools" version="1.12.1"> |
| 60 <install version="1.0"> | 60 <install version="1.0"> |
| 61 <actions_group> | 61 <actions_group> |
| 62 <actions architecture="x86_64" os="linux"> | 62 <actions architecture="x86_64" os="linux"> |
| 63 <action type="download_by_url">http://old-gep.wustl.edu/~galaxy/jbrowse_tools.tar.gz</action> | 63 <action type="download_by_url">http://old-gep.wustl.edu/~galaxy/jbrowse_tools.tar.gz</action> |
| 64 <action type="make_directory">$INSTALL_DIR/jbrowse</action> | |
| 64 <action type="move_directory_files"> | 65 <action type="move_directory_files"> |
| 65 <source_directory>bin</source_directory> | 66 <source_directory>.</source_directory> |
| 66 <destination_directory>$INSTALL_DIR/bin</destination_directory> | 67 <destination_directory>$INSTALL_DIR/jbrowse</destination_directory> |
| 67 </action> | 68 </action> |
| 68 </actions> | 69 </actions> |
| 69 <action type="set_environment"> | 70 <action type="set_environment"> |
| 70 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> | 71 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/jbrowse</environment_variable> |
| 72 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/jbrowse/bin</environment_variable> | |
| 71 </action> | 73 </action> |
| 72 </actions_group> | 74 </actions_group> |
| 73 </install> | 75 </install> |
| 74 <readme>The perl scripts for converting flat files to json.</readme> | 76 <readme>The perl scripts for converting flat files to json.</readme> |
| 75 </package> | 77 </package> |