Mercurial > repos > yating-l > hubarchivecreatortest

annotate test-data/gtf/inputs/StringTie_Assembled_Transcripts @ 1:85195e0d4b71 draft

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planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit b1ae7349f118a0fe7923d765020dfc684cf84116-dirty
author yating-l
date Fri, 29 Sep 2017 13:32:23 -0400
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85195e0d4b71 planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit b1ae7349f118a0fe7923d765020dfc684cf84116-dirty
yating-l
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1 # stringtie /home/svc_galaxy/new/galaxy/database/files/001/dataset_1193.dat -o /home/svc_galaxy/new/galaxy/database/files/001/dataset_1197.dat -p 1
85195e0d4b71 planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit b1ae7349f118a0fe7923d765020dfc684cf84116-dirty
yating-l
parents:
diff changeset
2 # StringTie version 1.2.3
85195e0d4b71 planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit b1ae7349f118a0fe7923d765020dfc684cf84116-dirty
yating-l
parents:
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3 contig16 StringTie transcript 1751 17824 1000 - . gene_id "STRG.1"; transcript_id "STRG.1.1"; cov "14.618678"; FPKM "322160.531250"; TPM "866155.937500";
85195e0d4b71 planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit b1ae7349f118a0fe7923d765020dfc684cf84116-dirty
yating-l
parents:
diff changeset
4 contig16 StringTie exon 1751 1897 1000 - . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "1"; cov "6.787892";
85195e0d4b71 planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit b1ae7349f118a0fe7923d765020dfc684cf84116-dirty
yating-l
parents:
diff changeset
5 contig16 StringTie exon 11285 11463 1000 - . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "2"; cov "19.860081";
85195e0d4b71 planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit b1ae7349f118a0fe7923d765020dfc684cf84116-dirty
yating-l
parents:
diff changeset
6 contig16 StringTie exon 11518 11705 1000 - . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "3"; cov "23.926477";
85195e0d4b71 planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit b1ae7349f118a0fe7923d765020dfc684cf84116-dirty
yating-l
parents:
diff changeset
7 contig16 StringTie exon 11759 11858 1000 - . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "4"; cov "17.452721";
85195e0d4b71 planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit b1ae7349f118a0fe7923d765020dfc684cf84116-dirty
yating-l
parents:
diff changeset
8 contig16 StringTie exon 11922 11975 1000 - . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "5"; cov "11.461867";
85195e0d4b71 planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit b1ae7349f118a0fe7923d765020dfc684cf84116-dirty
yating-l
parents:
diff changeset
9 contig16 StringTie exon 12601 12811 1000 - . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "6"; cov "11.876496";
85195e0d4b71 planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit b1ae7349f118a0fe7923d765020dfc684cf84116-dirty
yating-l
parents:
diff changeset
10 contig16 StringTie exon 17222 17337 1000 - . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "7"; cov "15.915709";
85195e0d4b71 planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit b1ae7349f118a0fe7923d765020dfc684cf84116-dirty
yating-l
parents:
diff changeset
11 contig16 StringTie exon 17406 17824 1000 - . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "8"; cov "11.738873";