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view test-data/stringtie_chromosome_end_coordinates/__main__.log @ 0:0bca8a6364a7 draft default tip

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planemo upload for repository https://github.com/Yating-L/hubarchivecreator-test commit 48b59e91e2dcc2e97735ee35d587960cbfbce932-dirty
author yating-l
date Wed, 21 Dec 2016 17:21:18 -0500
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DEBUG:root:#### Welcome in HubArchiveCreator Debug Mode ####

DEBUG:root:Calling faToTwoBit:
DEBUG:root:---------
DEBUG:root:	
DEBUG:root:Calling twoBitInfo:
DEBUG:root:---------
DEBUG:root:	
DEBUG:root:Calling sort:
DEBUG:root:---------
DEBUG:root:	
DEBUG:root:input_false_path: /home/svc_galaxy/new/galaxy/database/files/001/dataset_1329.dat
DEBUG:root:data_value: {u'order_index': u'10', u'name': u'StringTie_Assembled_Transcripts', u'track_color': u'#000000', u'group_name': u'Default group'}
DEBUG:root:Calling gtfToGenePred:
DEBUG:root:---------
DEBUG:root:	
DEBUG:root:Calling genePredToBigGenePred:
DEBUG:root:---------
DEBUG:root:	
DEBUG:root:Calling sort:
DEBUG:root:---------
DEBUG:root:	
DEBUG:root:sorted_bed_file_name: /home/svc_galaxy/new/galaxy/database/tmp/tmptjLL_6.sortedBed.bigGenePred
DEBUG:root:chrom_sizes_file_name: /home/svc_galaxy/new/galaxy/database/tmp/tmp5N24Cj.chrom.sizes
DEBUG:root:big_bed_file_name: /home/svc_galaxy/new/galaxy/database/jobs_directory/000/964/dataset_1331_files/myHub/Dbia3/tracks/StringTie_Assembled_Transcripts.bb
DEBUG:root:typeOption: bed12+8
DEBUG:root:autoSql: /home/svc_galaxy/new/shed_tools/toolshed.g2.bx.psu.edu/repos/rmarenco/hubarchivecreator/d786bca6a75d/hubarchivecreator/bigGenePred.as
DEBUG:root:tab option: True
DEBUG:root:Calling bedToBigBed:
DEBUG:root:---------
DEBUG:root:	
DEBUG:root:----- End of all_datatype_dictionary processing -----
DEBUG:root:all_datatype_ordered_dictionary keys are: [<Gtf.Gtf object at 0x179fd10>]
DEBUG:root:----- Beginning of Track adding processing -----
DEBUG:root:We just added in /home/svc_galaxy/new/galaxy/database/jobs_directory/000/964/dataset_1331_files/myHub/Dbia3/groups.txt the group Default group
DEBUG:root:We just added track StringTie_Assembled_Transcripts.bb (in group default_group)
DEBUG:root:----- End of Track adding processing -----
DEBUG:root:#### End of HubArchiveCreator Debug Mode: Bye! ####