Mercurial > repos > yating-l > data_manager_fetch_reference_data
changeset 30:2840fe5e5164 draft
planemo upload commit 0d49877c5a14fe4c14499ff97ae173803bf1a06c-dirty
| author | yating-l |
|---|---|
| date | Wed, 10 May 2017 12:29:54 -0400 |
| parents | c5f8cd66db69 |
| children | 1f51204f81e9 |
| files | data_manager_conf.xml tool_data_table_conf.xml.sample |
| diffstat | 2 files changed, 5 insertions(+), 5 deletions(-) [+] |
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--- a/data_manager_conf.xml Thu May 04 17:33:14 2017 -0400 +++ b/data_manager_conf.xml Wed May 10 12:29:54 2017 -0400 @@ -6,11 +6,11 @@ <column name="value" /> <column name="name" /> <column name="path" output_ref="out_file"> - <move type="directory"> - <source>${path}</source> - <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${name}/${path}</target> + <move type="directory" relativize_symlinks="True"> + <!--<source>${path}</source> --> + <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${name}/trained_dir</target> </move> - <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${name}/${path}</value_translation> + <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${name}/trained_dir/${path}</value_translation> <value_translation type="function">abspath</value_translation> </column> </output>
--- a/tool_data_table_conf.xml.sample Thu May 04 17:33:14 2017 -0400 +++ b/tool_data_table_conf.xml.sample Wed May 10 12:29:54 2017 -0400 @@ -1,5 +1,5 @@ <tables> - <table name="glimmer_hmm_trained_dir" comment_char="#"> + <table name="glimmer_hmm_trained_dir" comment_char="#" allow_duplicate_entries="False"> <columns>value, name, path</columns> <file path="tool-data/glimmer_hmm.loc" /> </table>