comparison data_manager/fetch_reference_data.py @ 3:2804b5f00dc7 draft

planemo upload

2:c4737db26737

REFERENCE_SOURCE_TO_DOWNLOAD = dict(glimmerhmm=download_from_GlimmerHMM)

def main():
    #Parse Command Line
    parser = argparse.ArgumentParser()
    args = parser.parse_args()

    filename = args[0]

    params = from_json_string(open(filename).read())
    target_directory = params['output_data'][0]['extra_files_path']
    os.mkdir(target_directory)
    data_manager_dict = {}

3:2804b5f00dc7

REFERENCE_SOURCE_TO_DOWNLOAD = dict(glimmerhmm=download_from_GlimmerHMM)

def main():
    #Parse Command Line
    parser = argparse.ArgumentParser()
    parser.add_argument('-o', '--out', help='Output file')
    args = parser.parse_args()

    filename = args.out

    params = from_json_string(open(filename).read())
    target_directory = params['output_data'][0]['extra_files_path']
    os.mkdir(target_directory)
    data_manager_dict = {}