Mercurial > repos > ximgchess > chap_test_20230411

changeset 16:d62238d36c1a draft

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planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit 3e8c1c54d5e12fdbc4f6c5cdae88b6d054db7c45-dirty
author ximgchess
date Wed, 12 Apr 2023 11:05:21 +0000
parents 6adee0a95ef3
children be5ef03d0e1f
files tomo/.tomo_reduce.xml.swp tomo/tomo_reduce.xml
diffstat 2 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
Binary file tomo/.tomo_reduce.xml.swp has changed
--- a/tomo/tomo_reduce.xml	Wed Apr 12 11:02:54 2023 +0000
+++ b/tomo/tomo_reduce.xml	Wed Apr 12 11:05:21 2023 +0000
@@ -7,6 +7,7 @@
     <command detect_errors="exit_code">
         <![CDATA[
             cp '$tool_config' reduce.yaml &&
+            cp reduce.yaml andor2.yaml &&
             cat reduce.yaml
         ]]>
     </command>
@@ -14,7 +15,7 @@
         <configfile name="tool_config">
             <![CDATA[
 #echo str($map.type_selector) #
-#if str($map.type_selector) == "YAML"
+#if str($map.type_selector) == "yaml"
 #cat andor2.yaml
 #end if
 #echo 'img_x_bounds:' #
@@ -71,7 +72,6 @@
         </collection>
         <data name="output_file" format="nex" label="Reduced tomography data" from_work_dir="output.nex"/>
         -->
-        <data name="output_file" format="yaml" label="Output" from_work_dir="reduce.yaml"/>
     </outputs>
     <help>
         <![CDATA[