# HG changeset patch
# User ximgchess
# Date 1681297521 0
# Node ID d62238d36c1af9ef4ceaacbe28bd147d95d0c766
# Parent  6adee0a95ef3e3b679c3b874f432a6650215c25f
planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit 3e8c1c54d5e12fdbc4f6c5cdae88b6d054db7c45-dirty

diff -r 6adee0a95ef3 -r d62238d36c1a tomo/.tomo_reduce.xml.swp
Binary file tomo/.tomo_reduce.xml.swp has changed
diff -r 6adee0a95ef3 -r d62238d36c1a tomo/tomo_reduce.xml
--- a/tomo/tomo_reduce.xml	Wed Apr 12 11:02:54 2023 +0000
+++ b/tomo/tomo_reduce.xml	Wed Apr 12 11:05:21 2023 +0000
@@ -7,6 +7,7 @@
     <command detect_errors="exit_code">
         <![CDATA[
             cp '$tool_config' reduce.yaml &&
+            cp reduce.yaml andor2.yaml &&
             cat reduce.yaml
         ]]>
     </command>
@@ -14,7 +15,7 @@
         <configfile name="tool_config">
             <![CDATA[
 #echo str($map.type_selector) #
-#if str($map.type_selector) == "YAML"
+#if str($map.type_selector) == "yaml"
 #cat andor2.yaml
 #end if
 #echo 'img_x_bounds:' #
@@ -71,7 +72,6 @@
         </collection>
         <data name="output_file" format="nex" label="Reduced tomography data" from_work_dir="output.nex"/>
         -->
-        <data name="output_file" format="yaml" label="Output" from_work_dir="reduce.yaml"/>
     </outputs>
     <help>
         <![CDATA[