Mercurial > repos > ximgchess > chap_test_20230411

changeset 38:aa625ead053f draft

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planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit eda217fb0afe5af50380a24b578c668db9c004f4-dirty
author ximgchess
date Wed, 12 Apr 2023 14:22:21 +0000
parents 656fa988a81d
children d0d62ad6daa4
files tomo/tomo_reduce.xml
diffstat 1 files changed, 2 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/tomo/tomo_reduce.xml	Wed Apr 12 13:59:58 2023 +0000
+++ b/tomo/tomo_reduce.xml	Wed Apr 12 14:22:21 2023 +0000
@@ -6,7 +6,8 @@
     <expand macro="requirements"/>
     <command detect_errors="exit_code">
         <![CDATA[
-        mkdir tomo_reduce_plots &&
+        mkdir tomo_reduce_plots
+        pip --exists-action i install --target='/nfs/chess/galaxy-dev/var/dependencies/_conda/envs' certif-pyspec==1.5.3
         #if str($map.type_selector) == "yaml"
             cp $input_file map.yaml &&
             cat $__tool_directory__/andor2.yaml $tool_config > reduce.yaml &&