Mercurial > repos > ximgchess > chap_test_20230411

changeset 25:99598d07fe7f draft

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planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit 3e8c1c54d5e12fdbc4f6c5cdae88b6d054db7c45-dirty
author ximgchess
date Wed, 12 Apr 2023 11:35:18 +0000
parents 0fc368bffc0f
children eb4a2cf5e7a8
files tomo/.tomo_reduce.xml.swp tomo/tomo_reduce.xml
diffstat 2 files changed, 4 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
Binary file tomo/.tomo_reduce.xml.swp has changed
--- a/tomo/tomo_reduce.xml	Wed Apr 12 11:30:56 2023 +0000
+++ b/tomo/tomo_reduce.xml	Wed Apr 12 11:35:18 2023 +0000
@@ -5,7 +5,7 @@
     </macros>
     <expand macro="requirements"/>
     <command detect_errors="exit_code">
-        <![CDATA[#slurp
+        <![CDATA[
         #if str($map.type_selector) == "yaml"
             cp $input_file map.yaml &&
             cat $__tool_directory__/andor2.yaml $tool_config > reduce.yaml &&
@@ -19,6 +19,9 @@
     <configfiles>
         <configfile name="tool_config">
             <![CDATA[#slurp
+#if str($map.type_selector) == "yaml"
+cat $__tool_directory__/andor2.yaml
+#end if
 #echo 'img_x_bounds:' #
 #if str($img_x_bounds.type_selector) == "full_range"
 #echo '- -1' #