# HG changeset patch
# User ximgchess
# Date 1681299318 0
# Node ID 99598d07fe7f50041e00decebf3624cfb721a035
# Parent  0fc368bffc0f9211a6f1b82819ae84206a91388a
planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit 3e8c1c54d5e12fdbc4f6c5cdae88b6d054db7c45-dirty

diff -r 0fc368bffc0f -r 99598d07fe7f tomo/.tomo_reduce.xml.swp
Binary file tomo/.tomo_reduce.xml.swp has changed
diff -r 0fc368bffc0f -r 99598d07fe7f tomo/tomo_reduce.xml
--- a/tomo/tomo_reduce.xml	Wed Apr 12 11:30:56 2023 +0000
+++ b/tomo/tomo_reduce.xml	Wed Apr 12 11:35:18 2023 +0000
@@ -5,7 +5,7 @@
     </macros>
     <expand macro="requirements"/>
     <command detect_errors="exit_code">
-        <![CDATA[#slurp
+        <![CDATA[
         #if str($map.type_selector) == "yaml"
             cp $input_file map.yaml &&
             cat $__tool_directory__/andor2.yaml $tool_config > reduce.yaml &&
@@ -19,6 +19,9 @@
     <configfiles>
         <configfile name="tool_config">
             <![CDATA[#slurp
+#if str($map.type_selector) == "yaml"
+cat $__tool_directory__/andor2.yaml
+#end if
 #echo 'img_x_bounds:' #
 #if str($img_x_bounds.type_selector) == "full_range"
 #echo '- -1' #