Mercurial > repos > ximgchess > chap_test_20230411

changeset 56:2abfae6df4f8 draft

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planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit eda217fb0afe5af50380a24b578c668db9c004f4-dirty
author ximgchess
date Wed, 12 Apr 2023 18:53:06 +0000
parents 55740619de5e
children 2a0a1c96b158
files pip_install.sh tomo/.tomo_reduce.xml.swp tomo/pip_install.sh tomo/tomo_reduce.xml
diffstat 4 files changed, 10 insertions(+), 11 deletions(-) [+]
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/pip_install.sh	Wed Apr 12 18:53:06 2023 +0000
@@ -0,0 +1,9 @@
+#!/bin/bash
+
+VERSION=`python --version | awk '{split($2,a,"."); printf "%s.%s", a[1], a[2]}'`
+PIPLOC=`which python | sed 's/bin\/python//g'`
+PIPLOC=$PIPLOC/lib/python$VERSION/site-packages
+echo $PIPLOC
+
+echo 'Try installing $1 to $PIPLOC'
+pip --exists-action i install --target $PIPLOC $1
Binary file tomo/.tomo_reduce.xml.swp has changed
--- a/tomo/pip_install.sh	Wed Apr 12 18:45:40 2023 +0000
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,8 +0,0 @@
-#!/bin/bash
-
-VERSION=`python --version | awk '{split($2,a,"."); printf "%s.%s", a[1], a[2]}'`
-PIPLOC=`which python | sed 's/bin\/python//g'`
-PIPLOC=$PIPLOC/lib/python$VERSION/site-packages
-echo $PIPLOC
-
-pip --exists-action i install --target $PIPLOC $1
--- a/tomo/tomo_reduce.xml	Wed Apr 12 18:45:40 2023 +0000
+++ b/tomo/tomo_reduce.xml	Wed Apr 12 18:53:06 2023 +0000
@@ -6,9 +6,7 @@
     <expand macro="requirements"/>
     <command detect_errors="exit_code">
         <![CDATA[
-        $__tool_directory__/pip_install.sh 'certif-pyspec==1.5.3' &&
-        echo $__tool_directory__ &&
-        ls $__tool_directory__/.. &&
+        $__tool_directory__/../pip_install.sh 'certif-pyspec==1.5.3' &&
         cp $tool_config reduce.yaml
         ]]>
     </command>