Mercurial > repos > ximgchess > chap_test_20230411

annotate tomo/pipeline_reduce_yaml.yaml @ 1:84a215623d9e draft

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planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
author ximgchess
date Tue, 11 Apr 2023 15:49:53 +0000
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children 2679014bb6eb
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84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
1 pipeline:
84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
2
84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
3 # Reduce tomography images
84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
4 - common.MultipleReader:
84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
5 readers:
84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
6 - YAMLReader:
84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
7 filename: map.yaml
84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
8 schema: MapConfig
84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
9 - YAMLReader:
84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
10 filename: reduce.yaml
84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
11 schema: TomoReduceConfig
84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
12 - tomo.TomoDataProcessor
84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
13 - common.NexusWriter:
84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
14 filename: output.nex
84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
15 force_overwrite: true