Mercurial > repos > wolma > rnastar_index_builder

changeset 0:0c5c464b17b5 draft

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Uploaded
author wolma
date Mon, 24 Jun 2019 11:18:36 -0400
parents
children 6127cd38980b
files tool_data_table_conf.xml.sample
diffstat 1 files changed, 12 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_data_table_conf.xml.sample	Mon Jun 24 11:18:36 2019 -0400
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+<tables>
+    <!-- Locations of all fasta files under genome directory -->
+    <table name="all_fasta" comment_char="#" allow_duplicate_entries="False">
+        <columns>value, dbkey, name, path</columns>
+        <file path="tool-data/all_fasta.loc" />
+    </table>
+    <!-- Locations of STAR indexes -->
+    <table name="rnastar_index2_versioned" comment_char="#" allow_duplicate_entries="False">
+        <columns>value, dbkey, name, path, with_gene_model, version</columns>
+        <file path="tool-data/rnastar_index2_versioned.loc" />
+    </table>
+</tables>