Mercurial > repos > trinity_ctat > ctat_tools_suite_tst1

changeset 2:157fba291f10 draft

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Adding centrifuge version to ctat_metagenomics to test if it fixes the missing centrifuge-kraken error.
author trinity_ctat
date Mon, 30 Apr 2018 09:42:15 -0400
parents 9421b764b590
children 1baa3d7e9582
files repository_dependencies.xml
diffstat 1 files changed, 4 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/repository_dependencies.xml	Fri Apr 27 16:02:54 2018 -0400
+++ b/repository_dependencies.xml	Mon Apr 30 09:42:15 2018 -0400
@@ -1,14 +1,14 @@
 <?xml version="1.0"?>
-<repositories description="These tools were developed by The Broad Institute as the Cancer Transcriptome Analysis Toolkit (CTAT).">  <repository changeset_revision="983f4f1c7f73" name="ctat_metagenomics" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+<repositories description="These tools were developed by The Broad Institute as the Cancer Transcriptome Analysis Toolkit (CTAT).">  <repository changeset_revision="64604f709f52" name="ctat_metagenomics" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
   <repository changeset_revision="9e1ec910f66f" name="ctat_abundance_estimation_to_matrix" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
   <repository changeset_revision="8e019a9f8b7c" name="ctat_rsem_align_and_estimate_abundance" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="3268b5e6ab4a" name="ctat_star_fusion" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="853bfaeea21c" name="ctat_star_fusion" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
   <repository changeset_revision="03155bc11cff" name="ctat_analyze_differential_expression" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
   <repository changeset_revision="94a777b31e20" name="ctat_discasm" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
   <repository changeset_revision="8291ea96690f" name="ctat_trinity_rnaseq" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
   <repository changeset_revision="78547514909d" name="ctat_clean_headers" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="ff3d3fa91f9a" name="ctat_fusion_inspector" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="2e98a907f573" name="ctat_fusion_inspector" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
   <repository changeset_revision="45798c8f5b95" name="ctat_concatenate" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
   <repository changeset_revision="f77032cd0463" name="ctat_edger_differential_expression" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="854531fa1645" name="ctat_gmap_fusion" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="0a76524a6e3a" name="ctat_gmap_fusion" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
 </repositories>