Mercurial > repos > trinity_ctat > ctat_star_fusion

changeset 1:dc3454ad7e09 draft

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Trying to fix invalid repository tag error for ctat_star_fusion.
author trinity_ctat
date Thu, 12 Apr 2018 14:19:02 -0400
parents 8484a9930003
children 3268b5e6ab4a
files ctat_star_fusion.xml
diffstat 1 files changed, 4 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/ctat_star_fusion.xml	Thu Apr 12 10:48:19 2018 -0400
+++ b/ctat_star_fusion.xml	Thu Apr 12 14:19:02 2018 -0400
@@ -1,4 +1,5 @@
-<tool id="ctat_star_fusion" name="ctat_star_fusion" version="1.0.0" profile="17.05">
+<tool id="ctat_star_fusion" name="ctat_star_fusion" version="1.0.1" profile="17.05">
+
     <description>Fusion-finding Pipeline Using the STAR Aligner</description>
     <requirements>
 	<requirement type="package" version="1.3.2">star-fusion</requirement>
@@ -33,6 +34,7 @@
            source="stderr"
            level="fatal"
            description="Unknown error encountered" />
+
     <inputs>
       <param format="fastq" name="left_input" type="data" label="Left/Forward strand reads" help=""/>
       <param format="fastq" name="right_input" type="data" label="Right/Reverse strand reads" help=""/>
@@ -42,8 +44,8 @@
           <validator type="no_options" message="No indexes are available" />
         </options>
       </param>
+    </inputs>
 
-    </inputs>
     <outputs>
       <data format="txt" name="starfusion_log" label="${tool.name} on ${on_string}: log" from_work_dir="subdir/Log.out"/>
       <data format="bam" name="aligned_bam" label="${tool.name} on ${on_string}: Aligned Bam" from_work_dir="subdir/Aligned.sortedByCoord.out.bam"/>