Mercurial > repos > trinity_ctat > ctat_star_fusion

changeset 5:42322c98b6ee draft

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Updating fusion-inspector, because --align_utils STAR is not valid flag anymore. Changed Star-Fusion to require Star 2.5.4a.
author trinity_ctat
date Thu, 17 May 2018 16:31:52 -0400
parents 31beded40e1a
children 669ac85ee4f2
files ctat_star_fusion.xml
diffstat 1 files changed, 4 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/ctat_star_fusion.xml	Wed May 16 14:33:58 2018 -0400
+++ b/ctat_star_fusion.xml	Thu May 17 16:31:52 2018 -0400
@@ -3,6 +3,10 @@
     <description>Fusion-finding Pipeline Using the STAR Aligner</description>
     <requirements>
 	<requirement type="package" version="1.3.2">star-fusion</requirement>
+        <!-- Added the following, because the 2.6 version of star does not
+        work with 1.3.2 star-fusion.
+        -->
+	<requirement type="package" version="2.5.4a">star</requirement>
         <!--
         FIX - the following may get added to the Star-Fusion recipe, but
         are not in it at the current time.