Mercurial > repos > trinity_ctat > ctat_lncrna_data_manager

changeset 17:ed9a7b924391 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author trinity_ctat
date Sat, 14 Jul 2018 00:13:38 -0400
parents 06f8b9c84b67
children 2b286008c100
files data_manager/add_ctat_lncrna_annotations.xml
diffstat 1 files changed, 10 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/data_manager/add_ctat_lncrna_annotations.xml	Fri Jun 22 12:31:25 2018 -0400
+++ b/data_manager/add_ctat_lncrna_annotations.xml	Sat Jul 14 00:13:38 2018 -0400
@@ -38,13 +38,21 @@
         <data name="out_file" format="data_manager_json" />
     </outputs>
     <help>
+        .. class:: infomark	
         Retrieve, and/or specify the location of, a CTAT lncrna annotations.
-        When download is true, the file at 
-        will be the URL from which the annotations is downloaded. Currently that is the only supported annotations.
+        When download is true, the annotations from this website_ will be downloaded.
+ 
+        Currently mm9,mm10,hg19,hg38 are supported.
+
+        .. class:: infomark
         Specify the Full Path of the destination where the CTAT lncrna annotations should be placed.
         If you already have the annotations, specify the full path of the location where it exists and leave the download box unchecked.
+
+        .. class:: infomark
         The display_name may be left empty if downloading. 
         The display_name will be used as the selector text of the entry in the data table.
+
+        .. _website: https://data.broadinstitute.org/Trinity/CTAT/lncrna/annotations.tar.gz         
     </help>
     <code file="add_ctat_lncrna_annotations.py" />
 </tool>