Mercurial > repos > trinity_ctat > ctat_gmap_fusion
changeset 1:0a76524a6e3a draft
Starting again with new suite.
| author | trinity_ctat |
|---|---|
| date | Fri, 27 Apr 2018 16:07:05 -0400 |
| parents | 854531fa1645 |
| children | a10082746830 |
| files | tool-data/ctat_genome_ref_libs.loc.sample tool-data/ctat_genome_resource_libs.loc.sample tool_data_table_conf.xml.sample |
| diffstat | 3 files changed, 17 insertions(+), 17 deletions(-) [+] |
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--- a/tool-data/ctat_genome_ref_libs.loc.sample Thu Apr 12 10:52:54 2018 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,15 +0,0 @@ -# This file lists the locations of CTAT Genome Reference Libraries -# Usually there will only be one library, but it is concievable -# that there could be multiple libraries. -# This file format is as follows -# (white space characters are TAB characters): -# -#<value> <name> <path> -# value is a unique id -# name is the display name -# path is the directory where the genome lib files are stored -# -#ctat_genome_ref_libs.loc could look like: -# -#GRCh38_v27_CTAT_lib_Feb092018 CTAT_GenomeRefLib_GRCh38_v27_CTAT_lib_Feb092018 /ctat/genome/reference/lib/path -#
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/ctat_genome_resource_libs.loc.sample Fri Apr 27 16:07:05 2018 -0400 @@ -0,0 +1,15 @@ +# This file lists the locations of CTAT Genome Resource Libraries +# Usually there will only be one library, but it is concievable +# that there could be multiple libraries. +# This file format is as follows +# (white space characters are TAB characters): +# +#<value> <name> <path> +# value is a unique id +# name is the display name +# path is the directory where the genome resource lib files are stored +# +#ctat_genome_resource_libs.loc could look like: +# +#GRCh38_v27_CTAT_lib_Feb092018 CTAT_GenomeResourceLib_GRCh38_v27_CTAT_lib_Feb092018 /path/to/ctat/genome/resource/lib/directory +#
--- a/tool_data_table_conf.xml.sample Thu Apr 12 10:52:54 2018 -0400 +++ b/tool_data_table_conf.xml.sample Fri Apr 27 16:07:05 2018 -0400 @@ -1,7 +1,7 @@ <tables> - <table name="ctat_genome_ref_libs" comment_char="#" allow_duplicate_entries="False"> + <table name="ctat_genome_resource_libs" comment_char="#" allow_duplicate_entries="False"> <columns>value, name, path</columns> - <file path="tool-data/ctat_genome_ref_libs.loc" /> + <file path="tool-data/ctat_genome_resource_libs.loc" /> </table> <table name="ctat_centrifuge_indexes" comment_char="#" allow_duplicate_entries="False"> <columns>value, name, path</columns>