comparison trinityToolWrapper.py @ 9:b6152cc26ffd draft

Trying to fix a syntax error.

8:28f6d3b8e931

    try:
        pipe1 = subprocess.Popen(["which", "Trinity"], stdout=subprocess.PIPE)
    except:
        msg = "You must set the environmental variable TRINITY_HOME to the base installation directory of Trinity before running {:s}.".format(sys.argv[0])
        sys.stderr.write(msg)
        t, v, tb = sys.exc_info()
        raise t, v, tb
    else:
        TrinityPath, err_info = pipe1.communicate()
        # FIX - probably should be checking err_info for errors...
        # Determine the TRINITY_BASE_DIR from output1.
        # If TrinityPath is a link, we need to dereference the link.

9:b6152cc26ffd

    try:
        pipe1 = subprocess.Popen(["which", "Trinity"], stdout=subprocess.PIPE)
    except:
        msg = "You must set the environmental variable TRINITY_HOME to the base installation directory of Trinity before running {:s}.".format(sys.argv[0])
        sys.stderr.write(msg)
        # t, v, tb = sys.exc_info()
        # raise t, v, tb
        # For some reason the above was giving a syntax error. 
        # A simple raise shoudl reraise the existing exception.
        raise
    else:
        TrinityPath, err_info = pipe1.communicate()
        # FIX - probably should be checking err_info for errors...
        # Determine the TRINITY_BASE_DIR from output1.
        # If TrinityPath is a link, we need to dereference the link.