Mercurial > repos > tomnl > flag_remove_peaks

changeset 7:168bff1f0b54 draft

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planemo upload for repository https://github.com/computational-metabolomics/dma-tools-galaxy commit fe424320c0b41d5eb18ed36892750ee9ae41bc0b-dirty
author tomnl
date Fri, 04 May 2018 10:21:13 -0400
parents 319730ef79f3
children 0ccb8c91be19
files cameradims.R
diffstat 1 files changed, 5 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/cameradims.R	Fri May 04 06:33:11 2018 -0400
+++ b/cameradims.R	Fri May 04 10:21:13 2018 -0400
@@ -79,6 +79,11 @@
 
 df <- df[df$i>opt$intensity_filter,]
 
+if (nrow(df)==0){
+   print('No peaks left after filtering')
+   quit()
+}
+
 
 if (opt$rule_type=='extended_large'){