Mercurial > repos > thanhlv > data_manager_build_ariba_database
annotate data_manager_conf.xml @ 0:a8bb47cc7625 draft
planemo upload for repository tbd commit 0af229dbbda0496819ca95938c2e0628db689134
| author | thanhlv |
|---|---|
| date | Tue, 08 Jan 2019 11:04:25 -0500 |
| parents | |
| children | 218301fbbb99 |
| rev | line source |
|---|---|
|
0
a8bb47cc7625
planemo upload for repository tbd commit 0af229dbbda0496819ca95938c2e0628db689134
thanhlv
parents:
diff
changeset
|
1 <?xml version="1.0"?> |
|
a8bb47cc7625
planemo upload for repository tbd commit 0af229dbbda0496819ca95938c2e0628db689134
thanhlv
parents:
diff
changeset
|
2 <data_managers> |
|
a8bb47cc7625
planemo upload for repository tbd commit 0af229dbbda0496819ca95938c2e0628db689134
thanhlv
parents:
diff
changeset
|
3 <data_manager tool_file="data_manager/ariba_database_builder.xml" id="ariba_database_builder" version="0.1.0"> |
|
a8bb47cc7625
planemo upload for repository tbd commit 0af229dbbda0496819ca95938c2e0628db689134
thanhlv
parents:
diff
changeset
|
4 <data_table name="ariba_databases"> |
|
a8bb47cc7625
planemo upload for repository tbd commit 0af229dbbda0496819ca95938c2e0628db689134
thanhlv
parents:
diff
changeset
|
5 <output> |
|
a8bb47cc7625
planemo upload for repository tbd commit 0af229dbbda0496819ca95938c2e0628db689134
thanhlv
parents:
diff
changeset
|
6 <column name="value" /> |
|
a8bb47cc7625
planemo upload for repository tbd commit 0af229dbbda0496819ca95938c2e0628db689134
thanhlv
parents:
diff
changeset
|
7 <column name="name" /> |
|
a8bb47cc7625
planemo upload for repository tbd commit 0af229dbbda0496819ca95938c2e0628db689134
thanhlv
parents:
diff
changeset
|
8 <column name="path" output_ref="out_file"> |
|
a8bb47cc7625
planemo upload for repository tbd commit 0af229dbbda0496819ca95938c2e0628db689134
thanhlv
parents:
diff
changeset
|
9 <move type="directory" relativize_symlinks="True"> |
|
a8bb47cc7625
planemo upload for repository tbd commit 0af229dbbda0496819ca95938c2e0628db689134
thanhlv
parents:
diff
changeset
|
10 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">ariba_databases</target> |
|
a8bb47cc7625
planemo upload for repository tbd commit 0af229dbbda0496819ca95938c2e0628db689134
thanhlv
parents:
diff
changeset
|
11 </move> |
|
a8bb47cc7625
planemo upload for repository tbd commit 0af229dbbda0496819ca95938c2e0628db689134
thanhlv
parents:
diff
changeset
|
12 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/ariba_databases/${value}</value_translation> |
|
a8bb47cc7625
planemo upload for repository tbd commit 0af229dbbda0496819ca95938c2e0628db689134
thanhlv
parents:
diff
changeset
|
13 <value_translation type="function">abspath</value_translation> |
|
a8bb47cc7625
planemo upload for repository tbd commit 0af229dbbda0496819ca95938c2e0628db689134
thanhlv
parents:
diff
changeset
|
14 </column> |
|
a8bb47cc7625
planemo upload for repository tbd commit 0af229dbbda0496819ca95938c2e0628db689134
thanhlv
parents:
diff
changeset
|
15 </output> |
|
a8bb47cc7625
planemo upload for repository tbd commit 0af229dbbda0496819ca95938c2e0628db689134
thanhlv
parents:
diff
changeset
|
16 </data_table> |
|
a8bb47cc7625
planemo upload for repository tbd commit 0af229dbbda0496819ca95938c2e0628db689134
thanhlv
parents:
diff
changeset
|
17 </data_manager> |
|
a8bb47cc7625
planemo upload for repository tbd commit 0af229dbbda0496819ca95938c2e0628db689134
thanhlv
parents:
diff
changeset
|
18 </data_managers> |
