Mercurial > repos > tduigou > parameters_maystro_workflow_1

diff test-data/test-JSON_workflow1.json @ 1:8bc9c1fb79f1 draft default tip

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planemo upload for repository https://github.com/brsynth/galaxytools/tree/main/tools/parameters_maystro commit 98d5e65b8008dbca117b2e0655cfdd54655fac48-dirty
author tduigou
date Thu, 31 Jul 2025 08:58:07 +0000
parents be08b189b32d
children
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--- a/test-data/test-JSON_workflow1.json	Thu Jul 17 14:01:21 2025 +0000
+++ b/test-data/test-JSON_workflow1.json	Thu Jul 31 08:58:07 2025 +0000
@@ -1,4 +1,8 @@
 {
+  "avoid_patterns": "BsaI_site\nBsmBI_site\nBbsI_site\nSapI_site\n8x1mer\n5x3mer\n9x2mer",
+  "hairpin_constraints": "stem_size=20, hairpin_window=200",
+  "gc_constraints": "mini=0.1, maxi=0.9,, window=100\nmini=0.3, maxi=0.7, window=100",
+  "kmer_size": "15",
   "execution": "true",
   "db_uri": "postgresql://postgres:RK17@localhost:5432/test_fragments_db",
   "table": "sample",