Mercurial > repos > tduigou > json_db_config_generating

annotate json_db_config_generating.xml @ 2:33ebf3ea3eb6 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
author tduigou
date Mon, 02 Jun 2025 15:04:08 +0000
parents 2909e53fac5b
children 8eb6c417d4f5
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
1 <tool id="json_db_config_generating" name="JSON DB_Config Generating" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="21.09">
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
2 <description>Genarate a JSON file used as DB config</description>
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
3 <macros>
2
33ebf3ea3eb6 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
4 <token name="@VERSION_SUFFIX@">2</token>
0
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
5 <token name="@TOOL_VERSION@">0.1.0</token>
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
6 </macros>
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
7 <command detect_errors="exit_code"><![CDATA[
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
8 python3 -c "import json; params = {
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
9 'execution': '$execution',
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
10 'JSON_db_uri': '$db_uri',
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
11 'JSON_table': '$table_name',
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
12 'JSON_fragment_column': '$fragment_column',
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
13 'JSON_sequence_column': '$sequence_column',
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
14 'JSON_annotation_column': '$annotation_column'
1
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
15 }; f = open('$output_json', 'w'); json.dump(params, f, indent=4); f.close()" && echo DEBG && cat '$output_json'
0
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
16 ]]></command>
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
17 <inputs>
1
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
18 <conditional name="db_request">
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
19 <param name="execution" type="select" label="Save To DB ?" help="If True the execution key in the json file will be true" optional="false">
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
20 <option value="false" selected="True">NO</option>
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
21 <option value="true">YES</option>
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
22 </param>
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
23 <when value='true'>
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
24 <section name='db_config' title='DB config' expanded='true'>
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
25 <param name="db_uri" type="text" label="DB Connection URI" optional="true" />
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
26 <param name="table_name" type="text" label="DB Table Name" optional="true" />
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
27 <param name="fragment_column" type="text" label="DB IDs Column Name" optional="true" />
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
28 <param name="sequence_column" type="text" label="DB Column Contains Sequence For ganbank File" optional="true" />
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
29 <param name="annotation_column" type="text" label="DB Column Contains Annotation For Ganbank File" optional="true" />
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
30 </section>
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
31 </when>
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
32 <when value='false'>
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
33 <section name='db_config' title='DB config' expanded='false'>
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
34 <param name="db_uri" type="text" label="DB Connection URI" optional="true" />
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
35 <param name="table_name" type="text" label="DB Table Name" optional="true" />
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
36 <param name="fragment_column" type="text" label="DB IDs Column Name" optional="true" />
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
37 <param name="sequence_column" type="text" label="DB Column Contains Sequence For ganbank File" optional="true" />
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
38 <param name="annotation_column" type="text" label="DB Column Contains Annotation For Ganbank File" optional="true" />
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
39 </section>
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
40 </when>
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
41 </conditional>
0
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
42 </inputs>
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
43 <outputs>
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
44 <data name="output_json" format="json" label="JSON Conf" />
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
45 </outputs>
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
46 <tests>
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
47 <!--test execution is true -->
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
48 <test>
1
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
49 <conditional name="db_request">
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
50 <param name="execution" value="true" />
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
51 <param name="db_config|db_uri" value="postgresql://postgres:RK17@localhost:5432/test_fragments_db" />
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
52 <param name="db_config|table_name" value="sample" />
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
53 <param name="db_config|fragment_column" value="fragment" />
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
54 <param name="db_config|sequence_column" value="sequence" />
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
55 <param name="db_config|annotation_column" value="annotation" />
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
56 </conditional>
0
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
57 <output name="output_json">
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
58 <assert_contents>
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
59 <has_json_property_with_text property="execution" text="true" />
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
60 <has_json_property_with_text property="JSON_db_uri" text="postgresql://postgres:RK17__at__localhost:5432/test_fragments_db" />
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
61 <has_json_property_with_text property="JSON_table" text="sample" />
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
62 <has_json_property_with_text property="JSON_fragment_column" text="fragment" />
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
63 <has_json_property_with_text property="JSON_sequence_column" text="sequence" />
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
64 <has_json_property_with_text property="JSON_annotation_column" text="annotation" />
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
65 </assert_contents>
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
66 </output>
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
67 </test>
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
68 <!--test execution is false -->
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
69 <test>
1
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
70 <conditional name="db_request">
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
71 <param name="execution" value="false" />
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
72 </conditional>
0
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
73 <output name="output_json">
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
74 <assert_contents>
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
75 <has_json_property_with_text property="execution" text="false" />
1
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
76 <has_json_property_with_text property="JSON_db_uri" text="" />
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
77 <has_json_property_with_text property="JSON_table" text="" />
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
78 <has_json_property_with_text property="JSON_fragment_column" text="" />
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
79 <has_json_property_with_text property="JSON_sequence_column" text="" />
2909e53fac5b planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
80 <has_json_property_with_text property="JSON_annotation_column" text="" />
0
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
81 </assert_contents>
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
82 </output>
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
83 </test>
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
84 </tests>
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
85
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
86 <help><![CDATA[
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
87 JSON DB_Config Generating
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
88 =========================
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
89
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
90 Generate a JSON file to be used as a DB configuration. This JSON file can later be used to access the database via the specified URI, as well as the defined table and column names.
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
91 This tool is primarily designed to control the execution of the save_to_db tool by enabling or disabling its execution and by providing the database configuration through a JSON file.
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
92
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
93 **Parameters**:
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
94 ---------------
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
95 * **execution key**: The value of execution key in the JSON (true or false)
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
96 * **DB Table Name**: Name of the target table in the PostgreSQL database.
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
97 * **DB Column Contains Sequence For ganbank File**: Column storing sequence data, expected to start with "ORIGIN".
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
98 * **DB Column Contains Annotation For Ganbank File**: Column containing annotation data, to save al part before "ORIGIN" in the .gb file.
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
99 * **DB IDs Column Name**: Column holding the unique fragment IDs.
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
100 * **DB Connection URI**: URI used to connect to the database (e.g., postgresql://user:password@host:port/DB_name).
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
101 * NOTE: This tool is designed to manage the execution of save_to_db within a workflow. If parameters are set directly in save_to_db via the user interface, the JSON file data will be ignored.
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
102 ]]></help>
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
103 <citations>
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
104 <citation type="bibtex">
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
105 @unpublished{json_db_config_generating
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
106 author = {Ramiz Khaled},
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
107 title = {{json_db_config_generating}},
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
108 url = {https://github.com/brsynth/},
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
109 }
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
110 </citation>
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
111 </citations>
95757ea6c333 planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
112 </tool>