Mercurial > repos > stevecassidy > wrassp
annotate g_f0.xml @ 5:0026cd452d0e draft default tip
planemo upload commit 72cee9103c0ae4acb5794afaed179bea2c729f2c-dirty
| author | stevecassidy |
|---|---|
| date | Sat, 11 Mar 2017 21:37:57 -0500 |
| parents | 22e59a5808e8 |
| children |
| rev | line source |
|---|---|
|
4
22e59a5808e8
planemo upload commit e5d2a8ba1fcf33758cdc07e0a14e86427752c968-dirty
stevecassidy
parents:
3
diff
changeset
|
1 <tool id="g_f0" name="Compute Pitch" version="0.01"> |
|
1
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
2 <description>using wrassp ksvF0 pitch tracker</description> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
3 |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
4 <requirements> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
5 <requirement type="package" version="0.1.4">r-wrassp</requirement> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
6 </requirements> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
7 |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
8 <command interpreter="bash"> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
9 r_wrapper.sh $__tool_directory__/g_f0.R --args ${wavfile} ${output} |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
10 ${beginTime} ${endTime} ${windowShift} ${gender} ${maxF} ${minF} ${minAmp} ${maxZCR} |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
11 </command> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
12 |
|
3
f188eb0b526d
planemo upload commit 2d22bc12c66a3d1949d4bf4c84e7ce7c4610383c-dirty
stevecassidy
parents:
1
diff
changeset
|
13 <stdio> |
|
f188eb0b526d
planemo upload commit 2d22bc12c66a3d1949d4bf4c84e7ce7c4610383c-dirty
stevecassidy
parents:
1
diff
changeset
|
14 <regex match="Linux: unexpected operator" |
|
f188eb0b526d
planemo upload commit 2d22bc12c66a3d1949d4bf4c84e7ce7c4610383c-dirty
stevecassidy
parents:
1
diff
changeset
|
15 source="stderr" |
|
f188eb0b526d
planemo upload commit 2d22bc12c66a3d1949d4bf4c84e7ce7c4610383c-dirty
stevecassidy
parents:
1
diff
changeset
|
16 level="warning" |
|
f188eb0b526d
planemo upload commit 2d22bc12c66a3d1949d4bf4c84e7ce7c4610383c-dirty
stevecassidy
parents:
1
diff
changeset
|
17 description="conda r-base bash bug" /> |
|
f188eb0b526d
planemo upload commit 2d22bc12c66a3d1949d4bf4c84e7ce7c4610383c-dirty
stevecassidy
parents:
1
diff
changeset
|
18 </stdio> |
|
1
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
19 |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
20 <inputs> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
21 <param name="wavfile" type="data" format="wav" label="Audio File" help="Audio file in WAV format"/> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
22 <param name="beginTime" type="integer" value="0" label="Start time for analysis (s)"/> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
23 <param name="endTime" type="integer" value="0" label="End Time for analysis (s) 0 means end of signal"/> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
24 <param name="windowShift" type="integer" value="5" label="Window Shift (ms)" help="set analysis window shift to dur ms"/> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
25 <param name="gender" type="select" label="Speaker Gender"> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
26 <option value="m" selected="true">Male</option> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
27 <option value="f">Female</option> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
28 <option value="u">Unknown</option> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
29 </param> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
30 <param name="maxF" type="integer" value="500" label="Maximum F0 Frequency (Hz)"/> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
31 <param name="minF" type="integer" value="50" label="Minimum F0 Frequency (Hz)"/> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
32 <param name="minAmp" type="integer" value="100" label="Amplitude threshold for voiced samples"/> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
33 <param name="maxZCR" type="integer" value="3000" label="Maximum zero crossing rate in Hz (for voicing detection)"/> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
34 </inputs> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
35 |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
36 <outputs> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
37 <data name="output" format="tabular" label="#echo $wavfile.element_identifier.replace('wav', 'f0') #" /> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
38 </outputs> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
39 |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
40 |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
41 <tests> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
42 <test> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
43 <param name="wavfile" value="1_1119_2_22_001-ch6-speaker16.wav"/> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
44 <output name="output" file="1_1119_2_22_001-F0.dat"/> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
45 </test> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
46 </tests> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
47 |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
48 <help>F0 analysis of the signal using the K. Schaefer-Vincent periodicity detection algortithm. |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
49 </help> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
50 |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
51 <citations> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
52 <citation type='bibtex'> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
53 @Manual{, |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
54 title = {wrassp: an R wrapper to the ASSP Library}, |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
55 author = {Lasse Bombien and Raphael Winkelmann and Michel |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
56 Scheffers}, |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
57 year = {2016}, |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
58 note = {R package version 0.1.4}, |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
59 } |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
60 </citation> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
61 </citations> |
|
dbcf9bc275e3
planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty
stevecassidy
parents:
diff
changeset
|
62 </tool> |
