diff g_f0.xml @ 1:dbcf9bc275e3 draft

planemo upload commit 063e049d569aeb45e1008cbf044f2dad850eca3d-dirty

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/g_f0.xml	Wed Dec 07 19:10:51 2016 -0500
@@ -0,0 +1,57 @@
+<tool id="g_f0" name="Get Pitch" version="0.01">
+    <description>using wrassp ksvF0 pitch tracker</description>
+
+    <requirements>
+        <requirement type="package" version="3.2.1">R</requirement>
+        <requirement type="package" version="0.1.4">r-wrassp</requirement>
+    </requirements>
+
+    <command interpreter="bash">
+        r_wrapper.sh $__tool_directory__/g_f0.R --args ${wavfile} ${output}
+        ${beginTime} ${endTime} ${windowShift} ${gender} ${maxF} ${minF} ${minAmp} ${maxZCR}
+     </command>
+
+
+    <inputs>
+        <param name="wavfile" type="data" format="wav" label="Audio File" help="Audio file in WAV format"/>
+        <param name="beginTime" type="integer" value="0" label="Start time for analysis (s)"/>
+        <param name="endTime" type="integer" value="0" label="End Time for analysis (s) 0 means end of signal"/>
+        <param name="windowShift" type="integer" value="5" label="Window Shift (ms)" help="set analysis window shift to dur ms"/>
+        <param name="gender" type="select" label="Speaker Gender">
+            <option value="m" selected="true">Male</option>
+            <option value="f">Female</option>
+            <option value="u">Unknown</option>
+        </param>
+        <param name="maxF" type="integer" value="500" label="Maximum F0 Frequency (Hz)"/>
+        <param name="minF" type="integer" value="50" label="Minimum F0 Frequency (Hz)"/>
+        <param name="minAmp" type="integer" value="100" label="Amplitude threshold for voiced samples"/>
+        <param name="maxZCR" type="integer" value="3000" label="Maximum zero crossing rate in Hz (for voicing detection)"/>
+    </inputs>
+
+    <outputs>
+        <data name="output" format="tabular" label="#echo $wavfile.element_identifier.replace('wav', 'f0') #" />
+    </outputs>
+
+
+    <tests>
+        <test>
+            <param name="wavfile" value="1_1119_2_22_001-ch6-speaker16.wav"/>
+            <output name="output" file="1_1119_2_22_001-F0.dat"/>
+        </test>
+    </tests>
+
+    <help>F0 analysis of the signal using the K. Schaefer-Vincent periodicity detection algortithm.
+    </help>
+
+    <citations>
+        <citation type='bibtex'>
+            @Manual{,
+              title = {wrassp: an R wrapper to the ASSP Library},
+              author = {Lasse Bombien and Raphael Winkelmann and Michel
+                Scheffers},
+              year = {2016},
+              note = {R package version 0.1.4},
+            }
+        </citation>
+    </citations>
+</tool>