view g_tokenize.xml @ 3:0df72a8ab095 draft default tip

planemo upload for repository https://github.com/Alveo/alveo-galaxy-tools commit f2432aaedd36ae7662873623d8861d0982dffdd2
author stevecassidy
date Mon, 20 Nov 2017 22:52:11 -0500
parents e991d4e60c17
children
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<tool id="Tokenize" name="Tokenize Text" version="1.0">
    <description>Split a text into words</description>

    <requirements>
        <requirement type="package" version="3.2.1">nltk</requirement>
    </requirements>

    <command interpreter="python">
        g_tokenize.py --input $input1 --output $tokens $lower $nopunct
    </command>

    <inputs>
        <param name="input1" type="data" format="txt"
               label="Select a suitable input file from your history"/>

        <param name='lower' type="boolean" truevalue="--lower" falsevalue=""
               label="Lowercase all tokens?"/>

        <param name='nopunct' type="boolean" truevalue="--nopunct" falsevalue=""
               label="Remove punctuation?"/>
    </inputs>
    <outputs>
        <data format="txt" name="tokens" label="${input1.name} Tokens"/>
    </outputs>
    <tests>
        <test>
            <param name='input1' value='sample_text.txt'/>
            <param name='lower' value='--lower'/>
            <param name='nopunct' value='--nopunct'/>
            <output name='tokens' file='sample_text_lower_nopunct.txt'/>
        </test>
        <test>
            <param name='input1' value='sample_text.txt'/>
            <param name='lower' value='--lower'/>
            <param name='nopunct' value=''/>
            <output name='tokens' file='sample_text_lower.txt'/>
        </test>
        <test>
            <param name='input1' value='sample_text.txt'/>
            <param name='lower' value=''/>
            <param name='nopunct' value=''/>
            <output name='tokens' file='sample_text_tok.txt'/>
        </test>

    </tests>

    <help>
        Tokenize a text into separate words, optionally remove punctuation and convert to lower case.
    </help>

</tool>