view items_to_bpf.xml @ 6:28df10f22b51 draft default tip

planemo upload commit 72cee9103c0ae4acb5794afaed179bea2c729f2c-dirty

<tool id="items_to_bpf" name="Item List to BPF" version="0.01" force_history_refresh="True">
    <description></description>

    <command interpreter="python">
        items_to_bpf.py --lexicon ${lexicon} --item_list ${item_list} --output_path BPFData
    </command>

    <inputs>
        <param name="item_list" type="data" format="item_list" label="Item List" help=""/>
        <param name="lexicon" type="data" format="tabular" label="Lexicon" help=""/>

        <param name="job_name" type="text" size="25"
               label="Supply a name for the output to remind you what it contains" value="BPF Files"/>
    </inputs>

    <outputs>
        <collection type="list" label="$job_name" name="output1">
            <discover_datasets pattern="(?P&lt;designation&gt;[^#]+)#(?P&lt;ext&gt;.+)" directory="BPFData"/>
        </collection>
    </outputs>

    <help>Generate a collection of BPF annotation files from an item list
    that contains the item orthography, these are then suitable for input
    to the MAUS forced alignment system.</help>
</tool>