Mercurial > repos > stevecassidy > alveoimport

changeset 7:5a8d9ddabec4 draft

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planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
author stevecassidy
date Wed, 12 Oct 2016 17:06:33 -0400
parents 56fda3d161f0
children 4d84952bdcb8
files alveo_api_key.xml alveo_get_item_data.py alveo_get_item_data.xml alveo_get_item_list.xml alveo_get_primary_text.xml alveo_item_list_importer.xml austalk-select-hVd-words.xml
diffstat 7 files changed, 6 insertions(+), 7 deletions(-) [+]
line wrap: on
line diff
--- a/alveo_api_key.xml	Thu Oct 06 11:14:39 2016 -0400
+++ b/alveo_api_key.xml	Wed Oct 12 17:06:33 2016 -0400
@@ -2,7 +2,7 @@
     <description>for use with Alveo tools</description>
 
     <requirements>
-        <requirement type="package" version="0.6">pyalveo</requirement>
+        <requirement type="package">pyalveo</requirement>
     </requirements>
 
     <command interpreter="python">
--- a/alveo_get_item_data.py	Thu Oct 06 11:14:39 2016 -0400
+++ b/alveo_get_item_data.py	Wed Oct 12 17:06:33 2016 -0400
@@ -31,7 +31,6 @@
         for row in csvreader:
             itemurls.append(row['ItemURL'])
 
-    print("ITEMS:", itemurls)
     itemlist = pyalveo.ItemGroup(itemurls, client)
 
     return itemlist
--- a/alveo_get_item_data.xml	Thu Oct 06 11:14:39 2016 -0400
+++ b/alveo_get_item_data.xml	Wed Oct 12 17:06:33 2016 -0400
@@ -2,7 +2,7 @@
     <description>Downloads files from the items in an Galaxy list of items</description>
 
     <requirements>
-        <requirement type="package" version="0.6">pyalveo</requirement>
+        <requirement type="package" version="0.7">pyalveo</requirement>
     </requirements>
 
     <command interpreter="python">
--- a/alveo_get_item_list.xml	Thu Oct 06 11:14:39 2016 -0400
+++ b/alveo_get_item_list.xml	Wed Oct 12 17:06:33 2016 -0400
@@ -2,7 +2,7 @@
     <description>Retrieves Item URLs from an Alveo Item List</description>
 
     <requirements>
-        <requirement type="package" version="0.6">pyalveo</requirement>
+        <requirement type="package" version="0.7">pyalveo</requirement>
     </requirements>
 
     <command interpreter="python">
--- a/alveo_get_primary_text.xml	Thu Oct 06 11:14:39 2016 -0400
+++ b/alveo_get_primary_text.xml	Wed Oct 12 17:06:33 2016 -0400
@@ -2,7 +2,7 @@
     <description>Downloads primary text from the items in an Alveo Item List</description>
 
     <requirements>
-        <requirement type="package" version="0.6">pyalveo</requirement>
+        <requirement type="package" version="0.7">pyalveo</requirement>
     </requirements>
 
     <command interpreter="python">
--- a/alveo_item_list_importer.xml	Thu Oct 06 11:14:39 2016 -0400
+++ b/alveo_item_list_importer.xml	Wed Oct 12 17:06:33 2016 -0400
@@ -2,7 +2,7 @@
     <description>Retrieves item list metadata.</description>
 
     <requirements>
-        <requirement type="package" version="0.6">pyalveo</requirement>
+        <requirement type="package" version="0.7">pyalveo</requirement>
     </requirements>
 
     <command interpreter="python">
--- a/austalk-select-hVd-words.xml	Thu Oct 06 11:14:39 2016 -0400
+++ b/austalk-select-hVd-words.xml	Wed Oct 12 17:06:33 2016 -0400
@@ -2,7 +2,7 @@
     <description>for a single speaker</description>
 
     <requirements>
-        <requirement type="package" version="0.6">pyalveo</requirement>
+        <requirement type="package" version="0.7">pyalveo</requirement>
     </requirements>
 
     <command interpreter="python">